diff --git a/results/cellprofiler/cellprofiler.mk b/results/cellprofiler/cellprofiler.mk deleted file mode 100644 index e573a60..0000000 --- a/results/cellprofiler/cellprofiler.mk +++ /dev/null @@ -1,29 +0,0 @@ -# Behavior: empty values are considered false -controls_only = yes - -# Paths -PREFIX_OUTPUT = 2017-02-20 -PREFIX_SRC = ../../src -IMAGES = ../z_projection -PIPELINE = $(PREFIX_SRC)/image-processing-pipeline.cpproj -FILELIST = $(PREFIX_OUTPUT)/filelist - -# Executables -cellprofiler = cellprofiler - -.PHONY: cellprofiler -cellprofiler : $(FILELIST) - $(cellprofiler) \ - --pipeline=$(PIPELINE) \ - --output-directory=$(PREFIX_OUTPUT) \ - --file-list=$(FILELIST) - -.PHONY : filelist -filelist : $(FILELIST) -$(FILELIST) : $(IMAGES) -ifneq ($(CLUSTER),) - find $< -type f | sort > $@ -else -#find $< -type f -regex '^502[^_]_(J18|I09|H09|N22|E20|M13|K11)' | sort > $@ - find $< -type f -regex '.*/502[^_]+_J18_S08.*' | sort > $@ -endif