Skip to content
Permalink
master
Switch branches/tags

Name already in use

A tag already exists with the provided branch name. Many Git commands accept both tag and branch names, so creating this branch may cause unexpected behavior. Are you sure you want to create this branch?

TriPOINT/tripoint.xml

Go to file
 
 
Cannot retrieve contributors at this time
146 lines (146 sloc) 11.3 KB
Raw Blame
Open in GitHub Desktop
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<vizmap documentVersion="3.0" id="VizMap-2017_12_29-09_58">
<visualStyle name="TriPOINT">
<network>
<visualProperty name="NETWORK_CENTER_Z_LOCATION" default="0.0"/>
<visualProperty name="NETWORK_BACKGROUND_PAINT" default="#FFFFFF"/>
<visualProperty name="NETWORK_TITLE" default=""/>
<visualProperty name="NETWORK_CENTER_Y_LOCATION" default="0.0"/>
<visualProperty name="NETWORK_NODE_SELECTION" default="true"/>
<visualProperty name="NETWORK_DEPTH" default="0.0"/>
<visualProperty name="NETWORK_EDGE_SELECTION" default="true"/>
<visualProperty name="NETWORK_HEIGHT" default="400.0"/>
<visualProperty name="NETWORK_CENTER_X_LOCATION" default="0.0"/>
<visualProperty name="NETWORK_WIDTH" default="550.0"/>
<visualProperty name="NETWORK_SCALE_FACTOR" default="1.0"/>
</network>
<node>
<dependency name="nodeCustomGraphicsSizeSync" value="true"/>
<dependency name="nodeSizeLocked" value="true"/>
<visualProperty name="NODE_FILL_COLOR" default="#FFCC33">
<continuousMapping attributeType="float" attributeName="expression">
<continuousMappingPoint lesserValue="#005400" greaterValue="#006900" equalValue="#006900" attrValue="-2.0"/>
<continuousMappingPoint lesserValue="#FFFFFF" greaterValue="#FFFFFF" equalValue="#FFFFFF" attrValue="0.0"/>
<continuousMappingPoint lesserValue="#C80000" greaterValue="#B2182B" equalValue="#C80000" attrValue="2.0"/>
</continuousMapping>
</visualProperty>
<visualProperty name="NODE_DEPTH" default="0.0"/>
<visualProperty name="NODE_Z_LOCATION" default="0.0"/>
<visualProperty name="COMPOUND_NODE_SHAPE" default="ROUND_RECTANGLE"/>
<visualProperty name="NODE_CUSTOMPAINT_7" default="DefaultVisualizableVisualProperty(id=NODE_CUSTOMPAINT_7, name=Node Custom Paint 7)"/>
<visualProperty name="NODE_LABEL_COLOR" default="#000000"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_SIZE_6" default="0.0"/>
<visualProperty name="NODE_PAINT" default="#787878"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_SIZE_3" default="0.0"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_2" default="org.cytoscape.ding.customgraphics.NullCustomGraphics,0,[ Remove Graphics ],"/>
<visualProperty name="NODE_LABEL_WIDTH" default="200.0"/>
<visualProperty name="NODE_SELECTED" default="false"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_POSITION_7" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_CUSTOMPAINT_5" default="DefaultVisualizableVisualProperty(id=NODE_CUSTOMPAINT_5, name=Node Custom Paint 5)"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_POSITION_8" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_Y_LOCATION" default="0.0"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_POSITION_5" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_BORDER_STROKE" default="SOLID"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_POSITION_2" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_SIZE_8" default="0.0"/>
<visualProperty name="NODE_SIZE" default="50.0">
<discreteMapping attributeType="string" attributeName="type">
<discreteMappingEntry value="30.0" attributeValue="NonCoding Target"/>
<discreteMappingEntry value="50.0" attributeValue="Pathway Gene"/>
</discreteMapping>
</visualProperty>
<visualProperty name="NODE_LABEL" default="">
<passthroughMapping attributeType="string" attributeName="name"/>
</visualProperty>
<visualProperty name="NODE_CUSTOMPAINT_9" default="DefaultVisualizableVisualProperty(id=NODE_CUSTOMPAINT_9, name=Node Custom Paint 9)"/>
<visualProperty name="NODE_TRANSPARENCY" default="255"/>
<visualProperty name="NODE_CUSTOMPAINT_6" default="DefaultVisualizableVisualProperty(id=NODE_CUSTOMPAINT_6, name=Node Custom Paint 6)"/>
<visualProperty name="NODE_LABEL_TRANSPARENCY" default="255"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_6" default="org.cytoscape.ding.customgraphics.NullCustomGraphics,0,[ Remove Graphics ],"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_SIZE_7" default="0.0"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_POSITION_1" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_LABEL_FONT_SIZE" default="12"/>
<visualProperty name="NODE_SHAPE" default="ELLIPSE"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_SIZE_2" default="0.0"/>
<visualProperty name="NODE_BORDER_PAINT" default="#000000"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_1" default="org.cytoscape.ding.customgraphics.NullCustomGraphics,0,[ Remove Graphics ],"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_9" default="org.cytoscape.ding.customgraphics.NullCustomGraphics,0,[ Remove Graphics ],"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_SIZE_1" default="0.0"/>
<visualProperty name="NODE_VISIBLE" default="true"/>
<visualProperty name="NODE_NESTED_NETWORK_IMAGE_VISIBLE" default="true"/>
<visualProperty name="COMPOUND_NODE_PADDING" default="10.0"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_POSITION_3" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_BORDER_TRANSPARENCY" default="255"/>
<visualProperty name="NODE_CUSTOMPAINT_4" default="DefaultVisualizableVisualProperty(id=NODE_CUSTOMPAINT_4, name=Node Custom Paint 4)"/>
<visualProperty name="NODE_HEIGHT" default="40.0"/>
<visualProperty name="NODE_BORDER_WIDTH" default="2.0"/>
<visualProperty name="NODE_TOOLTIP" default=""/>
<visualProperty name="NODE_CUSTOMPAINT_8" default="DefaultVisualizableVisualProperty(id=NODE_CUSTOMPAINT_8, name=Node Custom Paint 8)"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_3" default="org.cytoscape.ding.customgraphics.NullCustomGraphics,0,[ Remove Graphics ],"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_SIZE_4" default="0.0"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_POSITION_6" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_POSITION_9" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_7" default="org.cytoscape.ding.customgraphics.NullCustomGraphics,0,[ Remove Graphics ],"/>
<visualProperty name="NODE_SELECTED_PAINT" default="#FFFF00"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_8" default="org.cytoscape.ding.customgraphics.NullCustomGraphics,0,[ Remove Graphics ],"/>
<visualProperty name="NODE_WIDTH" default="60.0"/>
<visualProperty name="NODE_CUSTOMPAINT_3" default="DefaultVisualizableVisualProperty(id=NODE_CUSTOMPAINT_3, name=Node Custom Paint 3)"/>
<visualProperty name="NODE_X_LOCATION" default="0.0"/>
<visualProperty name="NODE_LABEL_FONT_FACE" default="SansSerif.plain,plain,12"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_SIZE_5" default="0.0"/>
<visualProperty name="NODE_LABEL_POSITION" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_POSITION_4" default="C,C,c,0.00,0.00"/>
<visualProperty name="NODE_CUSTOMPAINT_2" default="DefaultVisualizableVisualProperty(id=NODE_CUSTOMPAINT_2, name=Node Custom Paint 2)"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_4" default="org.cytoscape.ding.customgraphics.NullCustomGraphics,0,[ Remove Graphics ],"/>
<visualProperty name="NODE_CUSTOMPAINT_1" default="DefaultVisualizableVisualProperty(id=NODE_CUSTOMPAINT_1, name=Node Custom Paint 1)"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_5" default="org.cytoscape.ding.customgraphics.NullCustomGraphics,0,[ Remove Graphics ],"/>
<visualProperty name="NODE_CUSTOMGRAPHICS_SIZE_9" default="0.0"/>
</node>
<edge>
<dependency name="arrowColorMatchesEdge" value="false"/>
<visualProperty name="EDGE_TARGET_ARROW_SHAPE" default="NONE">
<discreteMapping attributeType="string" attributeName="type">
<discreteMappingEntry value="NONE" attributeValue="Association"/>
<discreteMappingEntry value="DELTA" attributeValue="Activation"/>
<discreteMappingEntry value="T" attributeValue="Inhibition"/>
</discreteMapping>
</visualProperty>
<visualProperty name="EDGE_VISIBLE" default="true"/>
<visualProperty name="EDGE_TOOLTIP" default=""/>
<visualProperty name="EDGE_SOURCE_ARROW_SIZE" default="6.0"/>
<visualProperty name="EDGE_LABEL_COLOR" default="#000000"/>
<visualProperty name="EDGE_LABEL_WIDTH" default="200.0"/>
<visualProperty name="EDGE_WIDTH" default="1.0"/>
<visualProperty name="EDGE_TARGET_ARROW_UNSELECTED_PAINT" default="#000000"/>
<visualProperty name="EDGE_LABEL_TRANSPARENCY" default="255"/>
<visualProperty name="EDGE_TRANSPARENCY" default="255">
<discreteMapping attributeType="string" attributeName="type">
<discreteMappingEntry value="50" attributeValue="Association"/>
<discreteMappingEntry value="255" attributeValue="Activation"/>
<discreteMappingEntry value="255" attributeValue="Inhibition"/>
</discreteMapping>
</visualProperty>
<visualProperty name="EDGE_LABEL_FONT_SIZE" default="10"/>
<visualProperty name="EDGE_STROKE_UNSELECTED_PAINT" default="#404040"/>
<visualProperty name="EDGE_SOURCE_ARROW_UNSELECTED_PAINT" default="#000000"/>
<visualProperty name="EDGE_BEND"/>
<visualProperty name="EDGE_CURVED" default="true"/>
<visualProperty name="EDGE_SOURCE_ARROW_SELECTED_PAINT" default="#FFFF00"/>
<visualProperty name="EDGE_LINE_TYPE" default="SOLID">
<discreteMapping attributeType="string" attributeName="type">
<discreteMappingEntry value="SOLID" attributeValue="Association"/>
<discreteMappingEntry value="SOLID" attributeValue="Activation"/>
<discreteMappingEntry value="SOLID" attributeValue="Inhibition"/>
<discreteMappingEntry value="LONG_DASH" attributeValue="NonCoding"/>
</discreteMapping>
</visualProperty>
<visualProperty name="EDGE_SELECTED" default="false"/>
<visualProperty name="EDGE_TARGET_ARROW_SIZE" default="6.0"/>
<visualProperty name="EDGE_LABEL_FONT_FACE" default="SansSerif.plain,plain,10"/>
<visualProperty name="EDGE_TARGET_ARROW_SELECTED_PAINT" default="#FFFF00"/>
<visualProperty name="EDGE_LABEL" default=""/>
<visualProperty name="EDGE_SOURCE_ARROW_SHAPE" default="NONE"/>
<visualProperty name="EDGE_STROKE_SELECTED_PAINT" default="#FF0000"/>
</edge>
</visualStyle>
</vizmap>