From 56e2fae3877477156ee2edd8cf5d67b2cb69213e Mon Sep 17 00:00:00 2001 From: Aliyar Ozercan Date: Sun, 2 Feb 2020 15:10:42 -0500 Subject: [PATCH] Update README.md --- README.md | 24 ++++++++++++------------ 1 file changed, 12 insertions(+), 12 deletions(-) diff --git a/README.md b/README.md index 8c7a0f0..400bffa 100644 --- a/README.md +++ b/README.md @@ -37,20 +37,20 @@ As an alternative to the command line, you can also use a graphical interface. W Please download and install the following *required* software: -- [ ] A code editor (e.g. [Visual Studio Code](https://code.visualstudio.com) or [Sublime](https://www.sublimetext.com) -- [ ] [Connectome Workbench](https://www.humanconnectome.org/software/connectome-workbench) for viewing MRI data -- [ ] [Globus Connect Personal](https://wiki.hpc.uconn.edu/index.php/Globus_Connect) for transferring files to the compute cluster. You may need to be on the campus netwokr to access this site. -- [ ] [Python 3.7 Anaconda distribution](https://www.anaconda.com/distribution/) +- [x] A code editor (e.g. [Visual Studio Code](https://code.visualstudio.com) or [Sublime](https://www.sublimetext.com) +- [x] [Connectome Workbench](https://www.humanconnectome.org/software/connectome-workbench) for viewing MRI data +- [x] [Globus Connect Personal](https://wiki.hpc.uconn.edu/index.php/Globus_Connect) for transferring files to the compute cluster. You may need to be on the campus netwokr to access this site. +- [x] [Python 3.7 Anaconda distribution](https://www.anaconda.com/distribution/) - [ ] For Windows users, you need an SSH client such as [PuTTY](https://www.chiark.greenend.org.uk/~sgtatham/putty/latest.html). ## Create accounts -- [ ] Neuroimaging analysis takes lots of computing time. You’ll want to run some of your analysis on the UConn Storrs HPC cluster, for which you’ll need to [request an account](http://hpc.uconn.edu/storrs/account-application). You can find your advisor’s NetID at [http://phonebook.uconn.edu](http://phonebook.uconn.edu). -- [ ] Once you get your account, make sure you can SSH to the cluster as described [here](https://wiki.hpc.uconn.edu/index.php/HPC_Getting_Started) +- [x] Neuroimaging analysis takes lots of computing time. You’ll want to run some of your analysis on the UConn Storrs HPC cluster, for which you’ll need to [request an account](http://hpc.uconn.edu/storrs/account-application). You can find your advisor’s NetID at [http://phonebook.uconn.edu](http://phonebook.uconn.edu). +- [x] Once you get your account, make sure you can SSH to the cluster as described [here](https://wiki.hpc.uconn.edu/index.php/HPC_Getting_Started) ## Learn Bash -- [ ] Work through these modules at the free tutorial site [learnshell.org](https://www.learnshell.org): +- [x] Work through these modules at the free tutorial site [learnshell.org](https://www.learnshell.org): - Hello world - Variables - Passing Arguments to the Script @@ -59,7 +59,7 @@ Please download and install the following *required* software: - Loops ## Learn Git -- [ ] Follow along with the examples in the [Beginner's Guide to Git](https://www.freecodecamp.org/news/the-beginners-guide-to-git-github/) (for command line users) +- [x] Follow along with the examples in the [Beginner's Guide to Git](https://www.freecodecamp.org/news/the-beginners-guide-to-git-github/) (for command line users) ## Edit this file @@ -77,8 +77,8 @@ When you see this online, you should see that the steps you need to complete hav In Markdown, a checkbox is a special list element written as: ```markdown -- [ ] Todo Item 1 -- [ ] Todo Item 2 +- [x] Todo Item 1 +- [x] Todo Item 2 ``` @@ -124,9 +124,9 @@ Rearrange the lines below to reflect your preference for the pipeline presentati 1. The lefthand pane will show any new or modified files in your workspace. `README.md` should have a yellow icon, indicating it has uncommited changes. 2. Click **Commit to master** to commit changes to your local repository - ![](img/commit.png) + ![x](img/commit.png) 3. Click **Push origin** to send your changes to your remote repository - ![](img/push.png) + ![x](img/push.png) 4. On GitHub, [create a pull request](https://help.github.com/articles/creating-a-pull-request/) to submit your work. \ No newline at end of file