Permalink
Cannot retrieve contributors at this time
Name already in use
A tag already exists with the provided branch name. Many Git commands accept both tag and branch names, so creating this branch may cause unexpected behavior. Are you sure you want to create this branch?
hw2/step2_error_3093909_4294967294.log
Go to fileThis commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
39 lines (39 sloc)
4.37 KB
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| [33mWARNING:[0m underlay of /usr/share/zoneinfo/Etc/UTC required more than 50 (57) bind mounts | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| 2020-02-21 12:23:07 - bidscoin - INFO ------------ START BIDStrainer ------------ | |
| 2020-02-21 12:23:07 - bidscoin - INFO Reading: /usr/local/miniconda/lib/python3.7/site-packages/bidscoin-2.3-py3.7.egg/heuristics/bidsmap_template.yaml | |
| 2020-02-21 12:24:12 - bidscoin - INFO Writing bidsmap to: /data/bids/code/bidscoin/bidsmap_sample.yaml | |
| 2020-02-21 12:24:12 - bidscoin - INFO ------------ FINISHED! ------------ | |
| [33mWARNING:[0m underlay of /usr/share/zoneinfo/Etc/UTC required more than 50 (57) bind mounts | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| ERROR: ld.so: object 'libcr_run.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. | |
| 2020-02-21 12:24:17 - bidscoin - INFO | |
| 2020-02-21 12:24:17 - bidscoin - INFO -------------- START BIDSmapper ------------ | |
| 2020-02-21 12:24:17 - bidscoin - INFO No bidsmap file found: /usr/local/miniconda/lib/python3.7/site-packages/bidscoin-2.3-py3.7.egg/heuristics/bidsmap.yaml | |
| 2020-02-21 12:24:17 - bidscoin - INFO Reading: /data/bids/code/bidscoin/bidsmap_sample.yaml | |
| 2020-02-21 12:24:17 - bidscoin - INFO Parsing: /data/raw/sub-TD902TD (subject 1/1) | |
| 2020-02-21 12:24:17 - bidscoin - INFO New 'extra_data' sample found: /data/raw/sub-TD902TD/001-AAHead_Scout/TD^TD902TD_001_AAHead_Scout_00001_00001.dcm | |
| 2020-02-21 12:24:17 - bidscoin - INFO New 'extra_data' sample found: /data/raw/sub-TD902TD/002-AAHead_Scout_MPR_sag/TD^TD902TD_002_AAHead_Scout_MPR_sag_00001_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO New 'extra_data' sample found: /data/raw/sub-TD902TD/003-AAHead_Scout_MPR_cor/TD^TD902TD_003_AAHead_Scout_MPR_cor_00001_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO New 'extra_data' sample found: /data/raw/sub-TD902TD/004-AAHead_Scout_MPR_tra/TD^TD902TD_004_AAHead_Scout_MPR_tra_00001_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO New 'anat' sample found: /data/raw/sub-TD902TD/005-T1w/TD^TD902TD_005_T1w_00001_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO New 'func' sample found: /data/raw/sub-TD902TD/006-task-music_SBRef/TD^TD902TD_006_task-music_SBRef_00001_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO New 'func' sample found: /data/raw/sub-TD902TD/007-task-music/TD^TD902TD_007_task-music_00001_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO New 'func' sample found: /data/raw/sub-TD902TD/008-task-music_PhysioLog/TD^TD902TD_008_task-music_PhysioLog_00927_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO New 'func' sample found: /data/raw/sub-TD902TD/009-task-prosody_SBRef/TD^TD902TD_009_task-prosody_SBRef_00001_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO New 'func' sample found: /data/raw/sub-TD902TD/010-task-prosody/TD^TD902TD_010_task-prosody_00001_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO New 'func' sample found: /data/raw/sub-TD902TD/011-task-prosody_PhysioLog/TD^TD902TD_011_task-prosody_PhysioLog_00046_00001.dcm | |
| 2020-02-21 12:24:18 - bidscoin - INFO Writing bidsmap to: /data/bids/code/bidscoin/bidsmap.yaml | |
| 2020-02-21 12:24:19 - bidscoin - INFO -------------- FINISHED! ------------------- | |
| 2020-02-21 12:24:19 - bidscoin - INFO | |
| 2020-02-21 12:24:19 - bidscoin - INFO No BIDScoin errors or warnings were reported | |
| 2020-02-21 12:24:19 - bidscoin - INFO | |
| 2020-02-21 12:24:19 - bidscoin - INFO For the complete log see: /data/bids/code/bidscoin/bidsmapper.log | |
| 2020-02-21 12:24:19 - bidscoin - INFO NB: logfiles may contain identifiable information, e.g. from pathnames |