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VQI_GenomeBrowser/VQI_GenomeBrowserDemo.html

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<html>
<head>
<script src="http://d3js.org/d3.v3.min.js"></script>
<script src="http://code.jquery.com/jquery-1.10.2.min.js"></script>
<script src="http://labratrevenge.com/d3-tip/javascripts/d3.tip.v0.6.3.js"></script>
<script src="../VQI_Publisher.js"></script>
<script src="./jquery.tipsy.js"></script>
<script src="./d3.tip.v0.6.3.js"></script>
<script src="VQI_GenomeBrowser.js"></script>
<script src="FileSaver.min.js"></script>
<script src="jquery.qtip.min.js"></script>
<link href="tipsy.css" rel="stylesheet" type="text/css" />
<link href="jquery.qtip.min.css" rel="stylesheet" type="text/css" />
</head>
<body>
<div id="test">
</div>
<div id="test2">
</div>
<footer>
<script type="text/javascript">
var obj = new VQI_GenomeBrowser("test",'dynamic_loading.php');
// var file_dir = "./";
// var cpg = file_dir + "./CpG_site_hg19.txt";
// var shoer = file_dir + "./shoer_hg19.txt";
// var shelf = file_dir + "./shelve_hg19.txt";
//obj.loadCPGFiles(cpg, shoer, shelf);
//var genomeFile = file_dir + "./T1_test.txt";
//obj.addTrackFile(genomeFile, "base", 'bed');
obj.addTrackFromDatabase();
var data = [["chr1", "896004", "896005", ".", "0", "+"],
["chr1", "976170", "976171", ".", "-.4", "+"],
["chr1", "1198674", "1198675", ".", "0", "+"],
["chr1", "1250433", "1250434", ".", "1", "+"],
["chr1", "1597292", "1597293", "rs79791328", "0", "+"],
["chr1", "1597292", "1597293", "rs79791328", "0", "+"]];
obj.uploadFileFromServer(data,"test","testgenome");
obj.uploadFileFromServer(data,"tests","testgenomes");
//setTimeout(function(){ obj.uploadFileFromServer(data,"test","testgenome"); }, 3000);
// var snpFile = file_dir + "./Tile2contentsnpplotter.txt";
//obj.addTrackFile(snpFile, "Tile2 Content Snp", 'bed');
</script>
</footer>
</body>
</html>