diff --git a/Tile2contentsnpplotter.txt b/Tile2contentsnpplotter.txt new file mode 100644 index 0000000..8ecf41e --- /dev/null +++ b/Tile2contentsnpplotter.txt @@ -0,0 +1,1886 @@ +chrUn_gl000237 2659 2660 . 0 + +chrUn_gl000225 2877 2878 . 0 + +chrUn_gl000234 3210 3211 . 0 + +chrUn_gl000220 14950 14951 . 0 + +chrUn_gl000234 20279 20280 . 0 + +chrUn_gl000232 35188 35189 . 0 + +chrUn_gl000212 43861 43862 . 0 + +chrUn_gl000225 66270 66271 . 0 + +chr9_gl000198_random 77493 77494 . 0 + +chr4_gl000193_random 86356 86357 . 0 + +chr4_gl000193_random 86519 86520 . 0 + +chr1 896004 896005 . 0 + +chr1 976170 976171 . 0 + +chr1 1198674 1198675 . 0 + +chr1 1250433 1250434 . 0 + +chr1 1597292 1597293 rs79791328 0 + +chr1 1597292 1597293 rs79791328 0 + +chr1 1688189 1688190 . 0 + +chr1 1897981 1897982 . 0 + +chr1 1987060 1987061 . 0 + +chr1 3555382 3555383 . 0 + +chr1 3692443 3692444 . 0 + +chr1 6142182 6142183 . 0 + +chr1 9027765 9027766 . 0 + +chr1 9785114 9785115 . 0 + +chr1 12025665 12025666 . 0 + +chr1 12320683 12320684 . 0 + +chr1 12780679 12780680 . 0 + +chr1 16053894 16053895 . 0 + +chr1 16580123 16580124 . 0 + +chr1 17555405 17555406 . 0 + +chr1 18016317 18016318 . 0 + +chr1 18017563 18017564 . 0 + +chr1 21103040 21103041 . 0 + +chr1 21582581 21582582 rs79178176 0 + +chr1 22055122 22055123 rs151180337 0 + +chr1 24124102 24124103 . 0 + +chr1 26737611 26737612 . 0 + +chr1 27101300 27101301 . 0 + +chr1 29650109 29650110 . 0 + +chr1 32628676 32628677 . 0 + +chr1 32670675 32670676 . 0 + +chr1 32691803 32691804 . 0 + +chr1 33832999 33833000 . 0 + +chr1 35470766 35470767 . 0 + +chr1 35847543 35847544 . 0 + +chr1 35920149 35920150 rs139769979 0 + +chr1 35922033 35922034 . 0 + +chr1 39174946 39174947 . 0 + +chr1 43905333 43905334 rs148946571 0 + +chr1 43908080 43908081 . 0 + +chr1 45297763 45297764 . 0 + +chr1 45308616 45308617 . 0 + +chr1 45504973 45504974 . 0 + +chr1 50569842 50569843 . 0 + +chr1 52275261 52275262 . 0 + +chr1 52490203 52490204 . 0 + +chr1 55591209 55591210 . 0 + +chr1 60314148 60314149 . 0 + +chr1 62483430 62483431 . 0 + +chr1 63070236 63070237 . 0 + +chr1 63070236 63070237 . 0 + +chr1 66618273 66618274 . 0 + +chr1 66820496 66820497 . 0 + +chr1 67208741 67208742 . 0 + +chr1 67359013 67359014 . 0 + +chr1 77334308 77334309 . 0 + +chr1 78509913 78509914 . 0 + +chr1 84356122 84356123 . 0 + +chr1 84356122 84356123 . 0 + +chr1 86375840 86375841 rs41306625 0 + +chr1 86848553 86848554 . 0 + +chr1 93682195 93682196 . 0 + +chr1 94016616 94016617 . 0 + +chr1 94953517 94953518 . 0 + +chr1 94956728 94956729 . 0 + +chr1 95001656 95001657 . 0 + +chr1 97278542 97278543 . 0 + +chr1 100588061 100588062 . 0 + +chr1 101705298 101705299 . 0 + +chr1 103023561 103023562 . 0 + +chr1 103573459 103573460 . 0 + +chr1 109466676 109466677 . 0 + +chr1 110085834 110085835 . 0 + +chr1 110293837 110293838 . 0 + +chr1 111863021 111863022 . 0 + +chr1 113058876 113058877 . 0 + +chr1 113083661 113083662 . 0 + +chr1 116519238 116519239 . 0 + +chr1 117303235 117303236 rs148196626 0 + +chr1 117487428 117487429 . 0 + +chr1 117503939 117503940 rs148524321 0 + +chr1 117624594 117624595 . 0 + +chr1 120013579 120013580 . 0 + +chr1 120114507 120114508 . 0 + +chr1 120345852 120345853 . 0 + +chr1 146549595 146549596 . 0 + +chr1 146696742 146696743 . 0 + +chr1 149879665 149879666 . 0 + +chr1 151060736 151060737 . 0 + +chr1 151849805 151849806 . 0 + +chr1 152081396 152081397 . 0 + +chr1 152192866 152192867 . 0 + +chr1 153941531 153941532 . 0 + +chr1 154226348 154226349 . 0 + +chr1 154229740 154229741 . 0 + +chr1 154245393 154245394 . 0 + +chr1 155252504 155252505 . 0 + +chr1 155987959 155987960 . 0 + +chr1 156437726 156437727 . 0 + +chr1 156640277 156640278 . 0 + +chr1 156950124 156950125 . 0 + +chr1 157488123 157488124 . 0 + +chr1 161654814 161654815 . 0 + +chr1 162482568 162482569 . 0 + +chr1 169267965 169267966 . 0 + +chr1 171501770 171501771 . 0 + +chr1 173961837 173961838 rs10691468 0 + +chr1 175049671 175049672 . 0 + +chr1 176671912 176671913 rs111906977 0 + +chr1 179271663 179271664 . 0 + +chr1 180153257 180153258 . 0 + +chr1 182763556 182763557 rs144001821 0 + +chr1 184723477 184723478 . 0 + +chr1 184723855 184723856 . 0 + +chr1 186056775 186056776 . 0 + +chr1 186056775 186056776 . 0 + +chr1 196392233 196392234 . 0 + +chr1 196577452 196577453 . 0 + +chr1 197111646 197111647 . 0 + +chr1 201035510 201035511 . 0 + +chr1 202129657 202129658 . 0 + +chr1 203149487 203149488 . 0 + +chr1 203679980 203679981 . 0 + +chr1 206603411 206603412 . 0 + +chr1 207791635 207791636 . 0 + +chr1 208603949 208603950 . 0 + +chr1 209879178 209879179 . 0 + +chr1 210856586 210856587 . 0 + +chr1 211847941 211847942 . 0 + +chr1 214792063 214792064 . 0 + +chr1 216373163 216373164 . 0 + +chr1 221053307 221053308 . 0 + +chr1 221053307 221053308 . 0 + +chr1 223396572 223396573 . 0 + +chr1 225528079 225528080 . 0 + +chr1 227598440 227598441 . 0 + +chr1 228528861 228528862 . 0 + +chr1 235617469 235617470 . 0 + +chr1 236716783 236716784 . 0 + +chr1 241755417 241755418 . 0 + +chr1 243800756 243800757 . 0 + +chr1 247582128 247582129 . 0 + +chr1 248525465 248525466 . 0 + +chr2 1521017 1521018 . 0 + +chr2 5833495 5833496 . 0 + +chr2 10192405 10192406 . 0 + +chr2 18764146 18764147 rs144184703 0 + +chr2 18764146 18764147 rs144184703 0 + +chr2 21251356 21251357 . 0 + +chr2 22666786 22666787 . 0 + +chr2 23784997 23784998 . 0 + +chr2 25982433 25982434 . 0 + +chr2 26251344 26251345 . 0 + +chr2 26399279 26399280 . 0 + +chr2 26864235 26864236 . 0 + +chr2 26950770 26950771 rs145849564 0 + +chr2 27305980 27305981 rs202157641 0 + +chr2 27465175 27465176 rs140918285 0 + +chr2 29226379 29226380 . 0 + +chr2 32249310 32249311 . 0 + +chr2 33500894 33500895 . 0 + +chr2 36623999 36624000 . 0 + +chr2 36706744 36706745 . 0 + +chr2 37240900 37240901 . 0 + +chr2 38200712 38200713 . 0 + +chr2 38200712 38200713 . 0 + +chr2 39262003 39262004 . 0 + +chr2 42990371 42990372 . 0 + +chr2 45171788 45171789 . 0 + +chr2 45236070 45236071 . 0 + +chr2 45645340 45645341 . 0 + +chr2 45879161 45879162 . 0 + +chr2 47251509 47251510 . 0 + +chr2 47707751 47707752 . 0 + +chr2 54887188 54887189 . 0 + +chr2 55464354 55464355 . 0 + +chr2 61462929 61462930 . 0 + +chr2 65469019 65469020 . 0 + +chr2 67632518 67632519 . 0 + +chr2 73430025 73430026 . 0 + +chr2 74086152 74086153 . 0 + +chr2 74492189 74492190 . 0 + +chr2 74719410 74719411 . 0 + +chr2 74742362 74742363 . 0 + +chr2 85661346 85661347 . 0 + +chr2 86433374 86433375 . 0 + +chr2 87013131 87013132 . 0 + +chr2 88407952 88407953 . 0 + +chr2 89161460 89161461 . 0 + +chr2 89309805 89309806 . 0 + +chr2 90108476 90108477 . 0 + +chr2 90465003 90465004 . 0 + +chr2 96781841 96781842 . 0 + +chr2 97377325 97377326 . 0 + +chr2 97463086 97463087 . 0 + +chr2 97504146 97504147 . 0 + +chr2 98373640 98373641 . 0 + +chr2 98853068 98853069 . 0 + +chr2 99443778 99443779 . 0 + +chr2 105859370 105859371 . 0 + +chr2 109513529 109513530 . 0 + +chr2 119727860 119727861 rs147253749 0 + +chr2 119728020 119728021 . 0 + +chr2 121741957 121741958 . 0 + +chr2 128935310 128935311 . 0 + +chr2 132275244 132275245 . 0 + +chr2 132275244 132275245 . 0 + +chr2 133402851 133402852 . 0 + +chr2 133402851 133402852 . 0 + +chr2 138420979 138420980 . 0 + +chr2 141625134 141625135 . 0 + +chr2 148713073 148713074 . 0 + +chr2 149856660 149856661 . 0 + +chr2 152385881 152385882 rs146604424 0 + +chr2 158390568 158390569 . 0 + +chr2 158786354 158786355 . 0 + +chr2 159519464 159519465 . 0 + +chr2 165559687 165559688 . 0 + +chr2 166430908 166430909 . 0 + +chr2 168098473 168098474 . 0 + +chr2 169717192 169717193 . 0 + +chr2 171503186 171503187 . 0 + +chr2 171793185 171793186 . 0 + +chr2 172951797 172951798 . 0 + +chr2 173352611 173352612 . 0 + +chr2 176574030 176574031 . 0 + +chr2 177036882 177036883 . 0 + +chr2 177054573 177054574 . 0 + +chr2 179397887 179397888 . 0 + +chr2 179397887 179397888 . 0 + +chr2 179397887 179397888 . 0 + +chr2 179415892 179415893 . 0 + +chr2 179415892 179415893 . 0 + +chr2 179415892 179415893 . 0 + +chr2 179463948 179463949 . 0 + +chr2 179463948 179463949 . 0 + +chr2 179463948 179463949 . 0 + +chr2 179667016 179667017 . 0 + +chr2 179783524 179783525 . 0 + +chr2 190445445 190445446 . 0 + +chr2 191524527 191524528 . 0 + +chr2 191996437 191996438 . 0 + +chr2 192228360 192228361 . 0 + +chr2 192821242 192821243 . 0 + +chr2 196545310 196545311 . 0 + +chr2 202575959 202575960 . 0 + +chr2 203826113 203826114 . 0 + +chr2 204003600 204003601 . 0 + +chr2 204074123 204074124 . 0 + +chr2 204074158 204074159 . 0 + +chr2 204143181 204143182 . 0 + +chr2 210823647 210823648 . 0 + +chr2 216230305 216230306 . 0 + +chr2 219561198 219561199 . 0 + +chr2 219618525 219618526 . 0 + +chr2 227924842 227924843 . 0 + +chr2 228476316 228476317 rs111332429 0 + +chr2 231174668 231174669 . 0 + +chr2 231624695 231624696 rs201874038 0 + +chr2 232018137 232018138 . 0 + +chr2 233394561 233394562 . 0 + +chr2 233433434 233433435 . 0 + +chr2 233749936 233749937 . 0 + +chr2 234357094 234357095 . 0 + +chr2 235405247 235405248 . 0 + +chr2 241536099 241536100 . 0 + +chr2 242603821 242603822 . 0 + +chr2 242743417 242743418 . 0 + +chr2 242815175 242815176 rs115952636 0 + +chr3 1637924 1637925 . 0 + +chr3 3196360 3196361 . 0 + +chr3 3209297 3209298 . 0 + +chr3 9918571 9918572 . 0 + +chr3 11915153 11915154 . 0 + +chr3 15756059 15756060 . 0 + +chr3 29628693 29628694 . 0 + +chr3 36944622 36944623 . 0 + +chr3 38592834 38592835 . 0 + +chr3 39435872 39435873 . 0 + +chr3 41291106 41291107 . 0 + +chr3 42681123 42681124 . 0 + +chr3 44396341 44396342 . 0 + +chr3 44819836 44819837 . 0 + +chr3 44954930 44954931 . 0 + +chr3 46654243 46654244 . 0 + +chr3 46658656 46658657 . 0 + +chr3 48612891 48612892 . 0 + +chr3 49293855 49293856 . 0 + +chr3 49569313 49569314 . 0 + +chr3 49700825 49700826 rs137954999 0 + +chr3 49755911 49755912 . 0 + +chr3 49755911 49755912 . 0 + +chr3 49879211 49879212 . 0 + +chr3 49935176 49935177 . 0 + +chr3 49940997 49940998 . 0 + +chr3 50192556 50192557 . 0 + +chr3 50313870 50313871 . 0 + +chr3 51929378 51929379 . 0 + +chr3 51969619 51969620 rs61729073 0 + +chr3 51975632 51975633 . 0 + +chr3 52473600 52473601 . 0 + +chr3 52538536 52538537 rs200927449 0 + +chr3 52547883 52547884 . 0 + +chr3 56932705 56932706 . 0 + +chr3 57496466 57496467 . 0 + +chr3 57570247 57570248 rs143859407 0 + +chr3 57631448 57631449 . 0 + +chr3 57898263 57898264 rs201788826 0 + +chr3 66355186 66355187 . 0 + +chr3 74385776 74385777 . 0 + +chr3 77542317 77542318 . 0 + +chr3 78737812 78737813 . 0 + +chr3 93615534 93615535 . 0 + +chr3 98307698 98307699 . 0 + +chr3 100071495 100071496 . 0 + +chr3 100566601 100566602 . 0 + +chr3 107508855 107508856 . 0 + +chr3 107778457 107778458 . 0 + +chr3 108746804 108746805 . 0 + +chr3 112253117 112253118 . 0 + +chr3 112547997 112547998 . 0 + +chr3 113697033 113697034 . 0 + +chr3 121825239 121825240 . 0 + +chr3 121980691 121980692 . 0 + +chr3 122843083 122843084 . 0 + +chr3 124527942 124527943 . 0 + +chr3 126214869 126214870 . 0 + +chr3 126268314 126268315 . 0 + +chr3 127387326 127387327 . 0 + +chr3 128758474 128758475 . 0 + +chr3 128890036 128890037 . 0 + +chr3 129251530 129251531 . 0 + +chr3 141144785 141144786 . 0 + +chr3 142054267 142054268 . 0 + +chr3 142499740 142499741 . 0 + +chr3 148868457 148868458 . 0 + +chr3 149007410 149007411 . 0 + +chr3 151148188 151148189 . 0 + +chr3 157207141 157207142 . 0 + +chr3 157822963 157822964 . 0 + +chr3 158523001 158523002 . 0 + +chr3 158541046 158541047 . 0 + +chr3 164750202 164750203 . 0 + +chr3 171944918 171944919 . 0 + +chr3 180693791 180693792 . 0 + +chr3 182880350 182880351 . 0 + +chr3 182941656 182941657 . 0 + +chr3 183773219 183773220 . 0 + +chr3 183855425 183855426 rs113994049 0 + +chr3 183966802 183966803 . 0 + +chr3 185209630 185209631 . 0 + +chr3 189585691 189585692 . 0 + +chr3 193188877 193188878 . 0 + +chr3 195613940 195613941 . 0 + +chr3 195943778 195943779 . 0 + +chr3 196387242 196387243 . 0 + +chr3 196434923 196434924 . 0 + +chr4 64743 64744 rs6855278 0 + +chr4 64743 64744 rs6855278 0 + +chr4 898475 898476 . 0 + +chr4 1231272 1231273 . 0 + +chr4 1989675 1989676 . 0 + +chr4 3129206 3129207 . 0 + +chr4 3344680 3344681 rs61748736 0 + +chr4 4270249 4270250 . 0 + +chr4 5141932 5141933 . 0 + +chr4 5624216 5624217 . 0 + +chr4 6380314 6380315 . 0 + +chr4 10083023 10083024 . 0 + +chr4 13577213 13577214 . 0 + +chr4 13629044 13629045 . 0 + +chr4 15063847 15063848 . 0 + +chr4 15629779 15629780 . 0 + +chr4 17528754 17528755 rs200725805 0 + +chr4 20492344 20492345 . 0 + +chr4 22394224 22394225 . 0 + +chr4 25396444 25396445 . 0 + +chr4 25783981 25783982 . 0 + +chr4 39116912 39116913 rs146066882 0 + +chr4 39116912 39116913 rs146066882 0 + +chr4 39217648 39217649 . 0 + +chr4 39217648 39217649 . 0 + +chr4 39219595 39219596 . 0 + +chr4 39219595 39219596 . 0 + +chr4 39343861 39343862 . 0 + +chr4 39343861 39343862 . 0 + +chr4 41646665 41646666 . 0 + +chr4 42154258 42154259 . 0 + +chr4 46060605 46060606 . 0 + +chr4 48485780 48485781 . 0 + +chr4 48559437 48559438 . 0 + +chr4 53497433 53497434 . 0 + +chr4 66356240 66356241 . 0 + +chr4 66535202 66535203 . 0 + +chr4 70108498 70108499 . 0 + +chr4 73935502 73935503 . 0 + +chr4 73935513 73935514 . 0 + +chr4 74442025 74442026 . 0 + +chr4 74852948 74852949 . 0 + +chr4 76572305 76572306 . 0 + +chr4 76787337 76787338 . 0 + +chr4 77662055 77662056 . 0 + +chr4 79334009 79334010 rs146767923 0 + +chr4 79851342 79851343 . 0 + +chr4 84029144 84029145 . 0 + +chr4 85609286 85609287 . 0 + +chr4 85638288 85638289 . 0 + +chr4 87679754 87679755 . 0 + +chr4 88048910 88048911 . 0 + +chr4 100522742 100522743 . 0 + +chr4 101338440 101338441 . 0 + +chr4 102981720 102981721 . 0 + +chr4 104027237 104027238 . 0 + +chr4 108931011 108931012 . 0 + +chr4 108985277 108985278 . 0 + +chr4 121843900 121843901 . 0 + +chr4 122301369 122301370 . 0 + +chr4 123276900 123276901 rs76115159 0 + +chr4 126239081 126239082 . 0 + +chr4 128632388 128632389 . 0 + +chr4 129783111 129783112 . 0 + +chr4 133998482 133998483 . 0 + +chr4 134072673 134072674 . 0 + +chr4 137559061 137559062 . 0 + +chr4 138451167 138451168 . 0 + +chr4 143003395 143003396 . 0 + +chr4 145767355 145767356 . 0 + +chr4 151223781 151223782 . 0 + +chr4 155312430 155312431 . 0 + +chr4 155410845 155410846 . 0 + +chr4 156643117 156643118 . 0 + +chr4 159092299 159092300 . 0 + +chr4 163032516 163032517 rs144695938 0 + +chr4 186510767 186510768 . 0 + +chr4 187557874 187557875 . 0 + +chr5 1294897 1294898 . 0 + +chr5 3600881 3600882 . 0 + +chr5 3600887 3600888 . 0 + +chr5 5489407 5489408 . 0 + +chr5 6449159 6449160 . 0 + +chr5 7826927 7826928 . 0 + +chr5 7827076 7827077 . 0 + +chr5 14293258 14293259 . 0 + +chr5 16701465 16701466 . 0 + +chr5 23521050 23521051 . 0 + +chr5 23689052 23689053 . 0 + +chr5 24498607 24498608 . 0 + +chr5 26740879 26740880 . 0 + +chr5 26885801 26885802 . 0 + +chr5 30365697 30365698 . 0 + +chr5 32010435 32010436 . 0 + +chr5 32400109 32400110 . 0 + +chr5 32712398 32712399 . 0 + +chr5 33162628 33162629 . 0 + +chr5 34945731 34945732 . 0 + +chr5 36270235 36270236 . 0 + +chr5 36686451 36686452 . 0 + +chr5 37350406 37350407 . 0 + +chr5 38925278 38925279 . 0 + +chr5 41929660 41929661 . 0 + +chr5 43412308 43412309 . 0 + +chr5 44795718 44795719 . 0 + +chr5 45303883 45303884 . 0 + +chr5 53751557 53751558 . 0 + +chr5 54771201 54771202 . 0 + +chr5 55212400 55212401 . 0 + +chr5 56208784 56208785 . 0 + +chr5 68709799 68709800 . 0 + +chr5 74670374 74670375 . 0 + +chr5 75757405 75757406 . 0 + +chr5 75914376 75914377 . 0 + +chr5 75914376 75914377 . 0 + +chr5 75970279 75970280 . 0 + +chr5 76707438 76707439 rs35864749 0 + +chr5 78111958 78111959 . 0 + +chr5 78375374 78375375 . 0 + +chr5 82838221 82838222 . 0 + +chr5 90159471 90159472 . 0 + +chr5 94404419 94404420 . 0 + +chr5 102201908 102201909 . 0 + +chr5 108281868 108281869 . 0 + +chr5 108282005 108282006 . 0 + +chr5 110428429 110428430 . 0 + +chr5 115346327 115346328 . 0 + +chr5 121187973 121187974 . 0 + +chr5 121310899 121310900 . 0 + +chr5 126250505 126250506 . 0 + +chr5 131978870 131978871 . 0 + +chr5 132015600 132015601 rs148162317 0 + +chr5 135583298 135583299 . 0 + +chr5 137520857 137520858 . 0 + +chr5 139232357 139232358 . 0 + +chr5 140071463 140071464 . 0 + +chr5 140167336 140167337 . 0 + +chr5 140182124 140182125 . 0 + +chr5 140182124 140182125 . 0 + +chr5 140182124 140182125 . 0 + +chr5 140188734 140188735 . 0 + +chr5 140188734 140188735 . 0 + +chr5 140188734 140188735 . 0 + +chr5 140188734 140188735 . 0 + +chr5 140201649 140201650 . 0 + +chr5 140201649 140201650 . 0 + +chr5 140201649 140201650 . 0 + +chr5 140201649 140201650 . 0 + +chr5 140201649 140201650 . 0 + +chr5 140215887 140215888 . 0 + +chr5 140215887 140215888 . 0 + +chr5 140215887 140215888 . 0 + +chr5 140215887 140215888 . 0 + +chr5 140215887 140215888 . 0 + +chr5 140215887 140215888 . 0 + +chr5 140215887 140215888 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140250149 140250150 . 0 + +chr5 140475049 140475050 . 0 + +chr5 140731268 140731269 . 0 + +chr5 140731268 140731269 . 0 + +chr5 140731268 140731269 . 0 + +chr5 140731268 140731269 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140774822 140774823 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140778899 140778900 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140802184 140802185 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 140810793 140810794 . 0 + +chr5 145894996 145894997 . 0 + +chr5 148997868 148997869 . 0 + +chr5 151138105 151138106 . 0 + +chr5 151304008 151304009 . 0 + +chr5 156715495 156715496 . 0 + +chr5 156887593 156887594 . 0 + +chr5 159766379 159766380 rs13360090 0 + +chr5 167589721 167589722 . 0 + +chr5 168195417 168195418 . 0 + +chr5 169506076 169506077 . 0 + +chr5 171201267 171201268 . 0 + +chr5 172110916 172110917 . 0 + +chr5 172347198 172347199 . 0 + +chr5 172659933 172659934 . 0 + +chr5 175574068 175574069 . 0 + +chr5 175582446 175582447 . 0 + +chr5 175810923 175810924 . 0 + +chr5 176024464 176024465 . 0 + +chr5 176315824 176315825 . 0 + +chr5 176938613 176938614 . 0 + +chr5 179079070 179079071 . 0 + +chr5 179227876 179227877 . 0 + +chr5 179264995 179264996 . 0 + +chr5 179264995 179264996 . 0 + +chr5 179542441 179542442 . 0 + +chr5 180030524 180030525 . 0 + +chr6 3850083 3850084 . 0 + +chr6 5216830 5216831 . 0 + +chr6 6305671 6305672 . 0 + +chr6 7370118 7370119 . 0 + +chr6 7583362 7583363 . 0 + +chr6 11011084 11011085 . 0 + +chr6 15513722 15513723 . 0 + +chr6 18160393 18160394 . 0 + +chr6 25916957 25916958 . 0 + +chr6 26032090 26032091 . 0 + +chr6 26468492 26468493 . 0 + +chr6 27251148 27251149 . 0 + +chr6 28962745 28962746 . 0 + +chr6 29527283 29527284 . 0 + +chr6 29581117 29581118 . 0 + +chr6 30121969 30121970 . 0 + +chr6 30554261 30554262 . 0 + +chr6 30993420 30993421 . 0 + +chr6 31602258 31602259 rs199623123 0 + +chr6 31753274 31753275 . 0 + +chr6 31830302 31830303 . 0 + +chr6 32165089 32165090 . 0 + +chr6 32373124 32373125 . 0 + +chr6 32781047 32781048 . 0 + +chr6 33132612 33132613 rs62405684 0 + +chr6 33170172 33170173 . 0 + +chr6 33555503 33555504 . 0 + +chr6 33555503 33555504 . 0 + +chr6 33555506 33555507 . 0 + +chr6 33555506 33555507 . 0 + +chr6 34957007 34957008 . 0 + +chr6 35195318 35195319 . 0 + +chr6 35285819 35285820 . 0 + +chr6 36683563 36683564 . 0 + +chr6 38472376 38472377 . 0 + +chr6 39895181 39895182 . 0 + +chr6 42627308 42627309 . 0 + +chr6 42641513 42641514 . 0 + +chr6 49427162 49427163 . 0 + +chr6 51275444 51275445 . 0 + +chr6 52883245 52883246 . 0 + +chr6 52902747 52902748 . 0 + +chr6 55739519 55739520 . 0 + +chr6 57190781 57190782 . 0 + +chr6 64029762 64029763 . 0 + +chr6 70043070 70043071 . 0 + +chr6 70049210 70049211 . 0 + +chr6 71546780 71546781 . 0 + +chr6 73696682 73696683 . 0 + +chr6 80202217 80202218 . 0 + +chr6 80732263 80732264 . 0 + +chr6 82930249 82930250 . 0 + +chr6 86240006 86240007 . 0 + +chr6 100838646 100838647 . 0 + +chr6 105733208 105733209 . 0 + +chr6 106991510 106991511 . 0 + +chr6 109775010 109775011 . 0 + +chr6 110300898 110300899 . 0 + +chr6 110679070 110679071 . 0 + +chr6 111135734 111135735 . 0 + +chr6 111306415 111306416 . 0 + +chr6 116837115 116837116 rs35398770 0 + +chr6 116837115 116837116 rs35398770 0 + +chr6 116966785 116966786 . 0 + +chr6 117113461 117113462 rs114066977 0 + +chr6 121451125 121451126 . 0 + +chr6 122766310 122766311 . 0 + +chr6 133032974 133032975 rs146663285 0 + +chr6 139495567 139495568 . 0 + +chr6 143074862 143074863 . 0 + +chr6 144719699 144719700 . 0 + +chr6 144758539 144758540 . 0 + +chr6 144999616 144999617 . 0 + +chr6 145148693 145148694 . 0 + +chr6 146243569 146243570 . 0 + +chr6 150717714 150717715 . 0 + +chr6 151004814 151004815 . 0 + +chr6 151293067 151293068 . 0 + +chr6 152639533 152639534 . 0 + +chr6 152647746 152647747 . 0 + +chr6 157469954 157469955 rs146077641 0 + +chr6 157469958 157469959 . 0 + +chr6 161020655 161020656 . 0 + +chr6 161132312 161132313 . 0 + +chr6 163666227 163666228 . 0 + +chr6 167435791 167435792 . 0 + +chr6 168352039 168352040 . 0 + +chr6 169646516 169646517 . 0 + +chr6 170159259 170159260 rs17860639 0 + +chr6 170190848 170190849 . 0 + +chr6 170190848 170190849 . 0 + +chr6 170597378 170597379 . 0 + +chr7 299970 299971 . 0 + +chr7 642429 642430 . 0 + +chr7 810118 810119 . 0 + +chr7 2634703 2634704 . 0 + +chr7 2974127 2974128 . 0 + +chr7 4824816 4824817 . 0 + +chr7 5644956 5644957 . 0 + +chr7 21550615 21550616 . 0 + +chr7 22202109 22202110 . 0 + +chr7 27205035 27205036 . 0 + +chr7 27205035 27205036 . 0 + +chr7 30491310 30491311 rs143500064 0 + +chr7 30921819 30921820 . 0 + +chr7 30921819 30921820 . 0 + +chr7 32582875 32582876 . 0 + +chr7 33069274 33069275 . 0 + +chr7 33217092 33217093 . 0 + +chr7 34009814 34009815 . 0 + +chr7 35201552 35201553 . 0 + +chr7 35928634 35928635 . 0 + +chr7 36320889 36320890 . 0 + +chr7 36917845 36917846 . 0 + +chr7 38670935 38670936 . 0 + +chr7 38861020 38861021 . 0 + +chr7 39649497 39649498 . 0 + +chr7 41740036 41740037 . 0 + +chr7 41740036 41740037 . 0 + +chr7 43484496 43484497 . 0 + +chr7 44284609 44284610 . 0 + +chr7 44579039 44579040 . 0 + +chr7 45928425 45928426 . 0 + +chr7 47242789 47242790 . 0 + +chr7 55496282 55496283 . 0 + +chr7 57830626 57830627 . 0 + +chr7 65551907 65551908 . 0 + +chr7 66416258 66416259 . 0 + +chr7 71868297 71868298 . 0 + +chr7 73634877 73634878 . 0 + +chr7 75192396 75192397 . 0 + +chr7 76924041 76924042 . 0 + +chr7 77789213 77789214 . 0 + +chr7 81635136 81635137 . 0 + +chr7 83034717 83034718 . 0 + +chr7 86415995 86415996 . 0 + +chr7 86541001 86541002 . 0 + +chr7 92219670 92219671 . 0 + +chr7 92219670 92219671 . 0 + +chr7 93518271 93518272 . 0 + +chr7 98507687 98507688 . 0 + +chr7 99297438 99297439 . 0 + +chr7 100184037 100184038 . 0 + +chr7 100193128 100193129 . 0 + +chr7 100193128 100193129 . 0 + +chr7 101063312 101063313 . 0 + +chr7 102343751 102343752 rs10230475 0 + +chr7 106809573 106809574 . 0 + +chr7 111480748 111480749 . 0 + +chr7 119454845 119454846 . 0 + +chr7 127347808 127347809 . 0 + +chr7 128519680 128519681 . 0 + +chr7 130008323 130008324 . 0 + +chr7 130295629 130295630 . 0 + +chr7 130352511 130352512 . 0 + +chr7 135279341 135279342 . 0 + +chr7 139257758 139257759 . 0 + +chr7 139268672 139268673 . 0 + +chr7 140698749 140698750 . 0 + +chr7 141540658 141540659 . 0 + +chr7 142961045 142961046 . 0 + +chr7 143009988 143009989 . 0 + +chr7 148702515 148702516 . 0 + +chr7 149744615 149744616 . 0 + +chr7 150389360 150389361 . 0 + +chr7 150648672 150648673 rs41314375 0 + +chr7 150713656 150713657 . 0 + +chr7 155174888 155174889 . 0 + +chr7 155511026 155511027 . 0 + +chr7 157414016 157414017 rs200808172 0 + +chr8 194478 194479 . 0 + +chr8 3611465 3611466 . 0 + +chr8 9538346 9538347 rs192458905 0 + +chr8 9667462 9667463 . 0 + +chr8 10557989 10557990 . 0 + +chr8 14181647 14181648 . 0 + +chr8 15588089 15588090 . 0 + +chr8 15978020 15978021 . 0 + +chr8 17919633 17919634 . 0 + +chr8 20107399 20107400 . 0 + +chr8 21608058 21608059 . 0 + +chr8 22082014 22082015 . 0 + +chr8 25222030 25222031 . 0 + +chr8 28645517 28645518 . 0 + +chr8 30209451 30209452 . 0 + +chr8 30651452 30651453 . 0 + +chr8 35583984 35583985 . 0 + +chr8 37686884 37686885 . 0 + +chr8 37718848 37718849 . 0 + +chr8 38139044 38139045 . 0 + +chr8 38414072 38414073 . 0 + +chr8 42328514 42328515 . 0 + +chr8 48855865 48855866 . 0 + +chr8 51351255 51351256 . 0 + +chr8 51617326 51617327 . 0 + +chr8 54915487 54915488 . 0 + +chr8 56986831 56986832 . 0 + +chr8 57294447 57294448 . 0 + +chr8 57354010 57354011 rs202194373 0 + +chr8 61852404 61852405 . 0 + +chr8 63902665 63902666 . 0 + +chr8 64321925 64321926 . 0 + +chr8 67039783 67039784 . 0 + +chr8 67061727 67061728 . 0 + +chr8 71506562 71506563 . 0 + +chr8 72952064 72952065 . 0 + +chr8 72952064 72952065 . 0 + +chr8 90995103 90995104 . 0 + +chr8 97157279 97157280 . 0 + +chr8 99440364 99440365 . 0 + +chr8 101053867 101053868 . 0 + +chr8 105507302 105507303 . 0 + +chr8 121408259 121408260 . 0 + +chr8 124428987 124428988 . 0 + +chr8 124664499 124664500 . 0 + +chr8 125568145 125568146 . 0 + +chr8 125570128 125570129 . 0 + +chr8 125989258 125989259 . 0 + +chr8 133811435 133811436 rs2244885 0 + +chr8 134114703 134114704 . 0 + +chr8 134114703 134114704 . 0 + +chr8 135545220 135545221 . 0 + +chr8 142166014 142166015 . 0 + +chr8 142229821 142229822 . 0 + +chr8 143623718 143623719 . 0 + +chr8 144990510 144990511 . 0 + +chr8 145171049 145171050 . 0 + +chr8 145534886 145534887 . 0 + +chr8 145618101 145618102 rs199670913 0 + +chr8 145753003 145753004 . 0 + +chr8 145753190 145753191 . 0 + +chr8 146015712 146015713 . 0 + +chr9 434694 434695 . 0 + +chr9 821116 821117 . 0 + +chr9 2115944 2115945 . 0 + +chr9 14729552 14729553 . 0 + +chr9 15189629 15189630 rs149486256 0 + +chr9 16685393 16685394 . 0 + +chr9 18906021 18906022 . 0 + +chr9 20502151 20502152 . 0 + +chr9 20717795 20717796 . 0 + +chr9 20986354 20986355 . 0 + +chr9 33952906 33952907 . 0 + +chr9 35059129 35059130 . 0 + +chr9 35698773 35698774 . 0 + +chr9 35704486 35704487 . 0 + +chr9 35818938 35818939 . 0 + +chr9 37020920 37020921 . 0 + +chr9 38424018 38424019 . 0 + +chr9 72070972 72070973 . 0 + +chr9 73235110 73235111 rs201672495 0 + +chr9 79318182 79318183 . 0 + +chr9 80409613 80409614 . 0 + +chr9 82321677 82321678 . 0 + +chr9 82973571 82973572 . 0 + +chr9 87322847 87322848 . 0 + +chr9 93629570 93629571 . 0 + +chr9 94984653 94984654 . 0 + +chr9 96069219 96069220 . 0 + +chr9 96437880 96437881 . 0 + +chr9 99220908 99220909 . 0 + +chr9 100983105 100983106 . 0 + +chr9 102730206 102730207 . 0 + +chr9 104324559 104324560 . 0 + +chr9 107299056 107299057 . 0 + +chr9 111909484 111909485 . 0 + +chr9 111979108 111979109 . 0 + +chr9 113468477 113468478 . 0 + +chr9 115936876 115936877 . 0 + +chr9 115969706 115969707 . 0 + +chr9 116811629 116811630 . 0 + +chr9 117118528 117118529 . 0 + +chr9 121971162 121971163 . 0 + +chr9 123637109 123637110 . 0 + +chr9 123782614 123782615 . 0 + +chr9 123782615 123782616 . 0 + +chr9 123906552 123906553 . 0 + +chr9 124525974 124525975 . 0 + +chr9 125424143 125424144 rs148839355 0 + +chr9 126129657 126129658 . 0 + +chr9 127618007 127618008 . 0 + +chr9 128122600 128122601 . 0 + +chr9 129931040 129931041 rs200532065 0 + +chr9 130117535 130117536 . 0 + +chr9 130242107 130242108 . 0 + +chr9 130507042 130507043 . 0 + +chr9 130653017 130653018 . 0 + +chr9 131186710 131186711 . 0 + +chr9 131568485 131568486 . 0 + +chr9 131762170 131762171 . 0 + +chr9 132395168 132395169 . 0 + +chr9 132962886 132962887 . 0 + +chr9 133576255 133576256 . 0 + +chr9 133760629 133760630 . 0 + +chr9 134305439 134305440 . 0 + +chr9 134401922 134401923 . 0 + +chr9 137658604 137658605 . 0 + +chr9 137710516 137710517 . 0 + +chr9 138557265 138557266 . 0 + +chr9 139096684 139096685 . 0 + +chr9 139739981 139739982 . 0 + +chr9 139865935 139865936 rs76735437 0 + +chr9 140611523 140611524 . 0 + +chr9 141070139 141070140 rs143443709 0 + +chr10 403717 403718 . 0 + +chr10 5815585 5815586 . 0 + +chr10 7679260 7679261 . 0 + +chr10 8106035 8106036 . 0 + +chr10 11361209 11361210 . 0 + +chr10 12595127 12595128 . 0 + +chr10 14894269 14894270 . 0 + +chr10 15255067 15255068 . 0 + +chr10 18439810 18439811 . 0 + +chr10 21319544 21319545 . 0 + +chr10 24825593 24825594 . 0 + +chr10 27367969 27367970 rs183618312 0 + +chr10 27859943 27859944 . 0 + +chr10 29812602 29812603 rs7070678 0 + +chr10 33552895 33552896 . 0 + +chr10 34400366 34400367 rs201774041 0 + +chr10 35896769 35896770 . 0 + +chr10 38241235 38241236 . 0 + +chr10 43609183 43609184 . 0 + +chr10 45478380 45478381 . 0 + +chr10 45959055 45959056 . 0 + +chr10 50019700 50019701 . 0 + +chr10 50165172 50165173 . 0 + +chr10 50603307 50603308 . 0 + +chr10 50953972 50953973 . 0 + +chr10 51582810 51582811 . 0 + +chr10 51582810 51582811 . 0 + +chr10 60160169 60160170 rs201110893 0 + +chr10 61022100 61022101 . 0 + +chr10 64966483 64966484 . 0 + +chr10 73439365 73439366 . 0 + +chr10 75550036 75550037 . 0 + +chr10 78844292 78844293 . 0 + +chr10 79999783 79999784 . 0 + +chr10 81901809 81901810 . 0 + +chr10 86214494 86214495 . 0 + +chr10 88212829 88212830 . 0 + +chr10 89711977 89711978 . 0 + +chr10 90583054 90583055 . 0 + +chr10 91511022 91511023 . 0 + +chr10 93577097 93577098 . 0 + +chr10 96098622 96098623 . 0 + +chr10 97515676 97515677 . 0 + +chr10 97515676 97515677 . 0 + +chr10 98469538 98469539 . 0 + +chr10 98743365 98743366 . 0 + +chr10 99640000 99640001 . 0 + +chr10 99790146 99790147 . 0 + +chr10 101420268 101420269 . 0 + +chr10 101949505 101949506 . 0 + +chr10 103879690 103879691 . 0 + +chr10 105184756 105184757 rs202170736 0 + +chr10 105201611 105201612 . 0 + +chr10 114912274 114912275 . 0 + +chr10 115804107 115804108 . 0 + +chr10 116013260 116013261 . 0 + +chr10 116247502 116247503 . 0 + +chr10 119303374 119303375 . 0 + +chr10 119303374 119303375 . 0 + +chr10 122625937 122625938 . 0 + +chr10 122625937 122625938 . 0 + +chr10 123279553 123279554 rs55745510 0 + +chr10 124049541 124049542 . 0 + +chr10 124350770 124350771 . 0 + +chr10 126136205 126136206 . 0 + +chr10 126301838 126301839 . 0 + +chr10 126480236 126480237 . 0 + +chr10 126671737 126671738 . 0 + +chr10 128148165 128148166 . 0 + +chr10 134739967 134739968 . 0 + +chr10 134942047 134942048 rs202114262 0 + +chr10 135280778 135280779 . 0 + +chr11 281334 281335 . 0 + +chr11 281344 281345 . 0 + +chr11 290902 290903 . 0 + +chr11 618144 618145 . 0 + +chr11 793561 793562 . 0 + +chr11 1086015 1086016 . 0 + +chr11 1161576 1161577 . 0 + +chr11 1215778 1215779 . 0 + +chr11 1858348 1858349 . 0 + +chr11 1858744 1858745 . 0 + +chr11 2417993 2417994 . 0 + +chr11 3681061 3681062 . 0 + +chr11 4411063 4411064 . 0 + +chr11 5345582 5345583 . 0 + +chr11 5655760 5655761 rs112822638 0 + +chr11 5655760 5655761 rs112822638 0 + +chr11 6260853 6260854 . 0 + +chr11 6644208 6644209 . 0 + +chr11 6816715 6816716 . 0 + +chr11 8693551 8693552 . 0 + +chr11 9191199 9191200 . 0 + +chr11 9199720 9199721 . 0 + +chr11 10800566 10800567 . 0 + +chr11 14902291 14902292 . 0 + +chr11 17111212 17111213 rs201587362 0 + +chr11 17482279 17482280 . 0 + +chr11 18762239 18762240 . 0 + +chr11 30914425 30914426 . 0 + +chr11 30947106 30947107 . 0 + +chr11 31671660 31671661 . 0 + +chr11 32635339 32635340 . 0 + +chr11 36422498 36422499 . 0 + +chr11 44151359 44151360 . 0 + +chr11 44925478 44925479 . 0 + +chr11 45793423 45793424 . 0 + +chr11 46689308 46689309 . 0 + +chr11 47317503 47317504 . 0 + +chr11 47422785 47422786 . 0 + +chr11 47463004 47463005 . 0 + +chr11 47470205 47470206 . 0 + +chr11 47597291 47597292 rs12798233 0 + +chr11 47806719 47806720 . 0 + +chr11 48632167 48632168 . 0 + +chr11 56000144 56000145 rs148962818 0 + +chr11 56058115 56058116 rs142532321 0 + +chr11 57414663 57414664 . 0 + +chr11 57509153 57509154 . 0 + +chr11 57509153 57509154 . 0 + +chr11 60482517 60482518 . 0 + +chr11 61722758 61722759 . 0 + +chr11 63439354 63439355 . 0 + +chr11 63669586 63669587 . 0 + +chr11 63884782 63884783 . 0 + +chr11 63884782 63884783 . 0 + +chr11 64522876 64522877 rs200757924 0 + +chr11 64756784 64756785 . 0 + +chr11 65294256 65294257 . 0 + +chr11 65484396 65484397 . 0 + +chr11 65649676 65649677 rs114953123 0 + +chr11 65714547 65714548 . 0 + +chr11 66006054 66006055 . 0 + +chr11 66052360 66052361 rs145552186 0 + +chr11 66802240 66802241 . 0 + +chr11 66813202 66813203 . 0 + +chr11 67013598 67013599 . 0 + +chr11 67267757 67267758 . 0 + +chr11 67941793 67941794 . 0 + +chr11 68173928 68173929 . 0 + +chr11 68193642 68193643 . 0 + +chr11 68216209 68216210 . 0 + +chr11 68518140 68518141 . 0 + +chr11 69071153 69071154 . 0 + +chr11 69518485 69518486 . 0 + +chr11 70221280 70221281 . 0 + +chr11 70830068 70830069 . 0 + +chr11 71260324 71260325 rs113483326 0 + +chr11 74303881 74303882 . 0 + +chr11 74415656 74415657 . 0 + +chr11 76077147 76077148 . 0 + +chr11 76169311 76169312 . 0 + +chr11 76796018 76796019 . 0 + +chr11 76905554 76905555 rs189972611 0 + +chr11 77552298 77552299 . 0 + +chr11 77825342 77825343 . 0 + +chr11 77825342 77825343 . 0 + +chr11 77838274 77838275 . 0 + +chr11 78440508 78440509 . 0 + +chr11 92702937 92702938 . 0 + +chr11 94532865 94532866 . 0 + +chr11 100730349 100730350 . 0 + +chr11 108006042 108006043 . 0 + +chr11 108158613 108158614 . 0 + +chr11 111368956 111368957 . 0 + +chr11 111592504 111592505 . 0 + +chr11 111594833 111594834 . 0 + +chr11 111896977 111896978 . 0 + +chr11 113270138 113270139 . 0 + +chr11 114284922 114284923 . 0 + +chr11 116661278 116661279 . 0 + +chr11 117062429 117062430 . 0 + +chr11 117062490 117062491 . 0 + +chr11 117066423 117066424 . 0 + +chr11 117066423 117066424 . 0 + +chr11 117152916 117152917 . 0 + +chr11 117314470 117314471 . 0 + +chr11 118210352 118210353 rs149624110 0 + +chr11 118343989 118343990 . 0 + +chr11 118370529 118370530 rs200232275 0 + +chr11 119183298 119183299 . 0 + +chr11 119998053 119998054 . 0 + +chr11 120348784 120348785 . 0 + +chr11 120745803 120745804 . 0 + +chr11 121970743 121970744 . 0 + +chr11 124056696 124056697 . 0 + +chr11 124747863 124747864 . 0 + +chr11 125359320 125359321 . 0 + +chr11 125647201 125647202 . 0 + +chr11 129165479 129165480 . 0 + +chr11 129756392 129756393 . 0 + +chr11 130536116 130536117 . 0 + +chr11 133714369 133714370 . 0 + +chr11 134048770 134048771 rs146518105 0 + +chr12 208311 208312 . 0 + +chr12 266028 266029 . 0 + +chr12 333743 333744 . 0 + +chr12 1290972 1290973 . 0 + +chr12 2750887 2750888 . 0 + +chr12 3736528 3736529 . 0 + +chr12 4747450 4747451 rs11063276 0 + +chr12 5841964 5841965 . 0 + +chr12 5946015 5946016 . 0 + +chr12 6450868 6450869 . 0 + +chr12 6574276 6574277 . 0 + +chr12 6747718 6747719 . 0 + +chr12 6924695 6924696 . 0 + +chr12 6938151 6938152 . 0 + +chr12 7242074 7242075 . 0 + +chr12 7242776 7242777 . 0 + +chr12 7242780 7242781 . 0 + +chr12 8808117 8808118 . 0 + +chr12 9581684 9581685 . 0 + +chr12 10228184 10228185 . 0 + +chr12 10999947 10999948 . 0 + +chr12 10999947 10999948 . 0 + +chr12 12308722 12308723 . 0 + +chr12 14664200 14664201 . 0 + +chr12 15068699 15068700 . 0 + +chr12 21795038 21795039 . 0 + +chr12 21967607 21967608 . 0 + +chr12 31604977 31604978 . 0 + +chr12 32772620 32772621 rs73083501 0 + +chr12 39740447 39740448 . 0 + +chr12 40911046 40911047 . 0 + +chr12 40916625 40916626 . 0 + +chr12 40923107 40923108 . 0 + +chr12 43945220 43945221 . 0 + +chr12 44770581 44770582 . 0 + +chr12 46592324 46592325 . 0 + +chr12 48177792 48177793 . 0 + +chr12 49411062 49411063 . 0 + +chr12 49483768 49483769 . 0 + +chr12 49483851 49483852 . 0 + +chr12 50155410 50155411 . 0 + +chr12 50190867 50190868 . 0 + +chr12 52447921 52447922 . 0 + +chr12 53045755 53045756 . 0 + +chr12 53092006 53092007 . 0 + +chr12 53241901 53241902 . 0 + +chr12 53555122 53555123 . 0 + +chr12 53900510 53900511 . 0 + +chr12 54394195 54394196 . 0 + +chr12 55615027 55615028 . 0 + +chr12 56478854 56478855 . 0 + +chr12 56651756 56651757 . 0 + +chr12 57456986 57456987 . 0 + +chr12 58026340 58026341 . 0 + +chr12 58131315 58131316 . 0 + +chr12 62698442 62698443 . 0 + +chr12 64816859 64816860 . 0 + +chr12 65270444 65270445 rs192519492 0 + +chr12 66245685 66245686 . 0 + +chr12 66786006 66786007 . 0 + +chr12 69082735 69082736 . 0 + +chr12 70304438 70304439 . 0 + +chr12 70688097 70688098 . 0 + +chr12 76749532 76749533 . 0 + +chr12 76866772 76866773 . 0 + +chr12 77424131 77424132 rs75419810 0 + +chr12 81762542 81762543 . 0 + +chr12 86377394 86377395 . 0 + +chr12 90015442 90015443 . 0 + +chr12 100789911 100789912 . 0 + +chr12 101700679 101700680 . 0 + +chr12 102133101 102133102 . 0 + +chr12 102433747 102433748 . 0 + +chr12 105288901 105288902 . 0 + +chr12 109293229 109293230 . 0 + +chr12 109728004 109728005 . 0 + +chr12 109834095 109834096 . 0 + +chr12 110483959 110483960 . 0 + +chr12 110823989 110823990 . 0 + +chr12 110895579 110895580 . 0 + +chr12 111800966 111800967 . 0 + +chr12 112369575 112369576 . 0 + +chr12 113448052 113448053 . 0 + +chr12 113515778 113515779 . 0 + +chr12 113546189 113546190 . 0 + +chr12 114261167 114261168 . 0 + +chr12 114399991 114399992 . 0 + +chr12 114793556 114793557 . 0 + +chr12 120600578 120600579 . 0 + +chr12 120652793 120652794 . 0 + +chr12 123481257 123481258 . 0 + +chr12 123811968 123811969 . 0 + +chr12 124350401 124350402 . 0 + +chr12 124366163 124366164 . 0 + +chr12 125453125 125453126 . 0 + +chr12 130884296 130884297 . 0 + +chr12 132479459 132479460 . 0 + +chr12 132547138 132547139 rs111782215 0 + +chr12 133317964 133317965 . 0 + +chr12 133360446 133360447 . 0 + +chr12 133682816 133682817 . 0 + +chr13 20610824 20610825 . 0 + +chr13 21978661 21978662 . 0 + +chr13 24334653 24334654 . 0 + +chr13 25016202 25016203 rs57197471 0 + +chr13 26413618 26413619 . 0 + +chr13 27847195 27847196 . 0 + +chr13 28851228 28851229 . 0 + +chr13 29233530 29233531 . 0 + +chr13 32783024 32783025 rs187526864 0 + +chr13 38152955 38152956 . 0 + +chr13 39544436 39544437 . 0 + +chr13 40238376 40238377 . 0 + +chr13 42877960 42877961 . 0 + +chr13 46357873 46357874 . 0 + +chr13 76112053 76112054 . 0 + +chr13 77779459 77779460 . 0 + +chr13 96578069 96578070 rs7992179 0 + +chr13 96705622 96705623 . 0 + +chr13 98009874 98009875 . 0 + +chr13 99042414 99042415 . 0 + +chr13 103280454 103280455 . 0 + +chr13 103286451 103286452 . 0 + +chr13 109672132 109672133 . 0 + +chr13 113571277 113571278 . 0 + +chr13 113795178 113795179 . 0 + +chr13 114193656 114193657 . 0 + +chr14 20818863 20818864 . 0 + +chr14 20944512 20944513 . 0 + +chr14 21249865 21249866 . 0 + +chr14 21776012 21776013 . 0 + +chr14 21990816 21990817 . 0 + +chr14 22167227 22167228 . 0 + +chr14 22294211 22294212 . 0 + +chr14 23518147 23518148 . 0 + +chr14 23523203 23523204 . 0 + +chr14 23587961 23587962 . 0 + +chr14 24701423 24701424 . 0 + +chr14 24701423 24701424 . 0 + +chr14 24784706 24784707 . 0 + +chr14 24805982 24805983 . 0 + +chr14 24877301 24877302 . 0 + +chr14 28734174 28734175 . 0 + +chr14 29242042 29242043 . 0 + +chr14 30396306 30396307 . 0 + +chr14 31778505 31778506 . 0 + +chr14 35487900 35487901 . 0 + +chr14 45330767 45330768 . 0 + +chr14 50319346 50319347 . 0 + +chr14 50597431 50597432 . 0 + +chr14 50626062 50626063 . 0 + +chr14 51223933 51223934 . 0 + +chr14 51344637 51344638 . 0 + +chr14 51382667 51382668 . 0 + +chr14 51404607 51404608 . 0 + +chr14 51411130 51411131 . 0 + +chr14 55529691 55529692 . 0 + +chr14 55605193 55605194 . 0 + +chr14 59931518 59931519 . 0 + +chr14 59978286 59978287 . 0 + +chr14 60977856 60977857 . 0 + +chr14 64443192 64443193 . 0 + +chr14 64443192 64443193 . 0 + +chr14 64449256 64449257 rs72489734 0 + +chr14 64449256 64449257 rs72489734 0 + +chr14 64449261 64449262 . 0 + +chr14 64449261 64449262 . 0 + +chr14 64747000 64747001 . 0 + +chr14 64747000 64747001 . 0 + +chr14 65031632 65031633 . 0 + +chr14 65068150 65068151 . 0 + +chr14 65392719 65392720 . 0 + +chr14 65392719 65392720 . 0 + +chr14 69392067 69392068 . 0 + +chr14 70990588 70990589 . 0 + +chr14 75567848 75567849 rs201467809 0 + +chr14 76965235 76965236 . 0 + +chr14 77697934 77697935 rs201147786 0 + +chr14 86089837 86089838 . 0 + +chr14 89014235 89014236 . 0 + +chr14 91744248 91744249 . 0 + +chr14 92909935 92909936 . 0 + +chr14 92909942 92909943 . 0 + +chr14 93650364 93650365 . 0 + +chr14 99925618 99925619 . 0 + +chr14 102028435 102028436 . 0 + +chr14 102496719 102496720 . 0 + +chr14 103369786 103369787 . 0 + +chr14 105173774 105173775 . 0 + +chr14 105239436 105239437 . 0 + +chr14 105356154 105356155 . 0 + +chr14 105843094 105843095 . 0 + +chr14 106321751 106321752 . 0 + +chr14 106321786 106321787 . 0 + +chr14 107140045 107140046 . 0 + +chr14 107198833 107198834 . 0 + +chr14 107218857 107218858 . 0 + +chr15 22490035 22490036 rs72687802 0 + +chr15 22546435 22546436 . 0 + +chr15 25585398 25585399 . 0 + +chr15 27128605 27128606 . 0 + +chr15 27216798 27216799 . 0 + +chr15 28195613 28195614 . 0 + +chr15 29397782 29397783 . 0 + +chr15 29488689 29488690 . 0 + +chr15 33945168 33945169 . 0 + +chr15 34115282 34115283 . 0 + +chr15 35163203 35163204 . 0 + +chr15 40293176 40293177 rs79403089 0 + +chr15 40477359 40477360 . 0 + +chr15 40489132 40489133 . 0 + +chr15 42128014 42128015 . 0 + +chr15 42128014 42128015 . 0 + +chr15 42618724 42618725 . 0 + +chr15 43559203 43559204 . 0 + +chr15 48483824 48483825 . 0 + +chr15 49033780 49033781 . 0 + +chr15 49097770 49097771 . 0 + +chr15 49714625 49714626 . 0 + +chr15 52537630 52537631 . 0 + +chr15 52635360 52635361 . 0 + +chr15 52970384 52970385 . 0 + +chr15 64693098 64693099 . 0 + +chr15 64982443 64982444 . 0 + +chr15 65219114 65219115 . 0 + +chr15 65347543 65347544 . 0 + +chr15 65621593 65621594 . 0 + +chr15 66784465 66784466 . 0 + +chr15 67496590 67496591 . 0 + +chr15 70976680 70976681 . 0 + +chr15 72193354 72193355 . 0 + +chr15 73029880 73029881 . 0 + +chr15 73615055 73615056 . 0 + +chr15 74653908 74653909 . 0 + +chr15 74653908 74653909 . 0 + +chr15 75094729 75094730 . 0 + +chr15 75654464 75654465 . 0 + +chr15 75687214 75687215 . 0 + +chr15 75974805 75974806 . 0 + +chr15 77907619 77907620 . 0 + +chr15 81517790 81517791 . 0 + +chr15 81627273 81627274 . 0 + +chr15 82555079 82555080 . 0 + +chr15 84245362 84245363 . 0 + +chr15 84611788 84611789 . 0 + +chr15 85343106 85343107 rs200937135 0 + +chr15 88428791 88428792 . 0 + +chr15 90172225 90172226 . 0 + +chr15 90328505 90328506 . 0 + +chr15 90610788 90610789 . 0 + +chr15 90818461 90818462 . 0 + +chr15 93262766 93262767 . 0 + +chr15 93617096 93617097 . 0 + +chr15 100332529 100332530 . 0 + +chr15 101447418 101447419 . 0 + +chr15 101929711 101929712 . 0 + +chr16 143367 143368 . 0 + +chr16 569814 569815 . 0 + +chr16 836779 836780 . 0 + +chr16 1997022 1997023 rs150384057 0 + +chr16 2762757 2762758 . 0 + +chr16 3779014 3779015 . 0 + +chr16 4165417 4165418 . 0 + +chr16 4511767 4511768 . 0 + +chr16 5115888 5115889 . 0 + +chr16 9857312 9857313 . 0 + +chr16 10784068 10784069 . 0 + +chr16 11001761 11001762 . 0 + +chr16 15141369 15141370 . 0 + +chr16 15141369 15141370 . 0 + +chr16 15680669 15680670 . 0 + +chr16 15853217 15853218 . 0 + +chr16 15870164 15870165 . 0 + +chr16 18805763 18805764 . 0 + +chr16 19492903 19492904 . 0 + +chr16 20360139 20360140 . 0 + +chr16 20380861 20380862 . 0 + +chr16 20814920 20814921 . 0 + +chr16 20817948 20817949 . 0 + +chr16 20996456 20996457 . 0 + +chr16 21213043 21213044 . 0 + +chr16 22144648 22144649 . 0 + +chr16 22155725 22155726 . 0 + +chr16 23706576 23706577 . 0 + +chr16 24576092 24576093 . 0 + +chr16 24835005 24835006 . 0 + +chr16 27802849 27802850 . 0 + +chr16 29815775 29815776 . 0 + +chr16 33605452 33605453 . 0 + +chr16 46389231 46389232 rs4294836 0 + +chr16 46754887 46754888 . 0 + +chr16 48752288 48752289 . 0 + +chr16 50338342 50338343 rs139027886 0 + +chr16 50841514 50841515 . 0 + +chr16 53878087 53878088 . 0 + +chr16 56362639 56362640 . 0 + +chr16 56872804 56872805 . 0 + +chr16 57149286 57149287 . 0 + +chr16 57392576 57392577 . 0 + +chr16 57946732 57946733 . 0 + +chr16 58540263 58540264 . 0 + +chr16 64294780 64294781 . 0 + +chr16 64981485 64981486 . 0 + +chr16 67325047 67325048 . 0 + +chr16 67380449 67380450 . 0 + +chr16 67654721 67654722 . 0 + +chr16 67682503 67682504 . 0 + +chr16 68021682 68021683 . 0 + +chr16 68405599 68405600 . 0 + +chr16 68842472 68842473 . 0 + +chr16 68862106 68862107 . 0 + +chr16 70390841 70390842 . 0 + +chr16 70399971 70399972 . 0 + +chr16 75238115 75238116 . 0 + +chr16 77468426 77468427 . 0 + +chr16 78312384 78312385 . 0 + +chr16 78312385 78312386 . 0 + +chr16 83214346 83214347 . 0 + +chr16 84214785 84214786 . 0 + +chr16 86544624 86544625 . 0 + +chr16 86581999 86582000 . 0 + +chr16 88110036 88110037 . 0 + +chr16 88600900 88600901 . 0 + +chr16 88874467 88874468 . 0 + +chr16 89341257 89341258 . 0 + +chr16 89574231 89574232 . 0 + +chr16 89795840 89795841 . 0 + +chr16 89953972 89953973 . 0 + +chr16 90099404 90099405 . 0 + +chr17 1381684 1381685 rs201626133 0 + +chr17 1561695 1561696 . 0 + +chr17 1587782 1587783 . 0 + +chr17 1613201 1613202 . 0 + +chr17 1648461 1648462 . 0 + +chr17 1960170 1960171 . 0 + +chr17 2929575 2929576 . 0 + +chr17 3655012 3655013 . 0 + +chr17 3659241 3659242 . 0 + +chr17 3687576 3687577 . 0 + +chr17 4145592 4145593 . 0 + +chr17 4166706 4166707 . 0 + +chr17 4772176 4772177 . 0 + +chr17 4883576 4883577 rs202053922 0 + +chr17 5040463 5040464 . 0 + +chr17 5403892 5403893 . 0 + +chr17 7452803 7452804 . 0 + +chr17 7452803 7452804 . 0 + +chr17 8379098 8379099 . 0 + +chr17 8457182 8457183 . 0 + +chr17 9489965 9489966 . 0 + +chr17 9578376 9578377 . 0 + +chr17 9737312 9737313 . 0 + +chr17 10424919 10424920 . 0 + +chr17 10539132 10539133 . 0 + +chr17 10728687 10728688 . 0 + +chr17 11783489 11783490 . 0 + +chr17 13504076 13504077 . 0 + +chr17 14205286 14205287 . 0 + +chr17 16005117 16005118 . 0 + +chr17 17069716 17069717 . 0 + +chr17 17409676 17409677 . 0 + +chr17 17761072 17761073 . 0 + +chr17 19749978 19749979 . 0 + +chr17 20629962 20629963 . 0 + +chr17 27042376 27042377 . 0 + +chr17 27904189 27904190 . 0 + +chr17 29112854 29112855 . 0 + +chr17 30211616 30211617 . 0 + +chr17 30368308 30368309 . 0 + +chr17 30368308 30368309 . 0 + +chr17 30469934 30469935 . 0 + +chr17 30611789 30611790 . 0 + +chr17 37343828 37343829 . 0 + +chr17 37357387 37357388 . 0 + +chr17 38078771 38078772 . 0 + +chr17 38511563 38511564 . 0 + +chr17 39119793 39119794 . 0 + +chr17 39959714 39959715 rs199650058 0 + +chr17 40375393 40375394 . 0 + +chr17 40457753 40457754 . 0 + +chr17 40734098 40734099 . 0 + +chr17 40843652 40843653 rs185924574 0 + +chr17 40865077 40865078 . 0 + +chr17 41400809 41400810 . 0 + +chr17 41832673 41832674 . 0 + +chr17 42232428 42232429 . 0 + +chr17 42249457 42249458 . 0 + +chr17 42289545 42289546 . 0 + +chr17 43333618 43333619 . 0 + +chr17 43333618 43333619 . 0 + +chr17 46692119 46692120 . 0 + +chr17 48684339 48684340 . 0 + +chr17 49082461 49082462 . 0 + +chr17 53848451 53848452 . 0 + +chr17 54587980 54587981 . 0 + +chr17 54926113 54926114 . 0 + +chr17 55962729 55962730 . 0 + +chr17 56282987 56282988 . 0 + +chr17 56434577 56434578 . 0 + +chr17 56557148 56557149 . 0 + +chr17 57465493 57465494 . 0 + +chr17 59067363 59067364 . 0 + +chr17 61514690 61514691 . 0 + +chr17 63186340 63186341 . 0 + +chr17 65027920 65027921 . 0 + +chr17 66988514 66988515 . 0 + +chr17 67107130 67107131 . 0 + +chr17 70862440 70862441 . 0 + +chr17 71193106 71193107 . 0 + +chr17 71196920 71196921 . 0 + +chr17 73206054 73206055 . 0 + +chr17 73500305 73500306 . 0 + +chr17 73513159 73513160 . 0 + +chr17 73515315 73515316 . 0 + +chr17 74011405 74011406 . 0 + +chr17 74158688 74158689 . 0 + +chr17 74289643 74289644 . 0 + +chr17 74398185 74398186 . 0 + +chr17 74470574 74470575 . 0 + +chr17 75208309 75208310 . 0 + +chr17 78224947 78224948 . 0 + +chr17 79077593 79077594 . 0 + +chr17 79090189 79090190 . 0 + +chr17 79428742 79428743 . 0 + +chr17 79514674 79514675 . 0 + +chr17 79649028 79649029 . 0 + +chr17 79650724 79650725 . 0 + +chr17 79826559 79826560 . 0 + +chr17 79892547 79892548 rs148344245 0 + +chr17 80044995 80044996 . 0 + +chr18 3168799 3168800 . 0 + +chr18 5291271 5291272 . 0 + +chr18 5292289 5292290 . 0 + +chr18 8545761 8545762 . 0 + +chr18 14124199 14124200 . 0 + +chr18 21124380 21124381 . 0 + +chr18 21705305 21705306 . 0 + +chr18 29178610 29178611 rs28933981 0 + +chr18 30825378 30825379 . 0 + +chr18 31802875 31802876 . 0 + +chr18 32398026 32398027 . 0 + +chr18 32431755 32431756 . 0 + +chr18 42643369 42643370 . 0 + +chr18 43422165 43422166 . 0 + +chr18 44268625 44268626 . 0 + +chr18 56191291 56191292 . 0 + +chr18 63821048 63821049 . 0 + +chr18 66509271 66509272 . 0 + +chr18 72109207 72109208 . 0 + +chr18 72227864 72227865 . 0 + +chr18 74091896 74091897 . 0 + +chr18 76933561 76933562 . 0 + +chr18 77805770 77805771 . 0 + +chr19 733980 733981 . 0 + +chr19 960052 960053 . 0 + +chr19 1046325 1046326 . 0 + +chr19 1369382 1369383 . 0 + +chr19 1796902 1796903 . 0 + +chr19 1800005 1800006 . 0 + +chr19 1820070 1820071 rs200280374 0 + +chr19 2337550 2337551 . 0 + +chr19 2344331 2344332 . 0 + +chr19 2431957 2431958 . 0 + +chr19 2790660 2790661 . 0 + +chr19 3118886 3118887 rs191674809 0 + +chr19 3530532 3530533 . 0 + +chr19 3538812 3538813 . 0 + +chr19 3637223 3637224 . 0 + +chr19 4028853 4028854 . 0 + +chr19 4157375 4157376 . 0 + +chr19 4172021 4172022 . 0 + +chr19 4293002 4293003 . 0 + +chr19 4332184 4332185 . 0 + +chr19 4338553 4338554 . 0 + +chr19 4702228 4702229 . 0 + +chr19 6414230 6414231 . 0 + +chr19 6475264 6475265 . 0 + +chr19 9062446 9062447 . 0 + +chr19 9251201 9251202 . 0 + +chr19 9579693 9579694 . 0 + +chr19 10107291 10107292 . 0 + +chr19 10222281 10222282 . 0 + +chr19 10222281 10222282 . 0 + +chr19 10334862 10334863 . 0 + +chr19 10445164 10445165 . 0 + +chr19 10795503 10795504 . 0 + +chr19 10812432 10812433 . 0 + +chr19 10893816 10893817 . 0 + +chr19 11018579 11018580 . 0 + +chr19 11097487 11097488 . 0 + +chr19 11283960 11283961 . 0 + +chr19 11328083 11328084 . 0 + +chr19 11833872 11833873 rs201385594 0 + +chr19 12306015 12306016 . 0 + +chr19 12816346 12816347 . 0 + +chr19 13201139 13201140 . 0 + +chr19 13218619 13218620 . 0 + +chr19 13885307 13885308 . 0 + +chr19 13910657 13910658 . 0 + +chr19 15226806 15226807 . 0 + +chr19 15271574 15271575 rs79447691 0 + +chr19 15288776 15288777 . 0 + +chr19 15308442 15308443 . 0 + +chr19 15469546 15469547 . 0 + +chr19 16092337 16092338 . 0 + +chr19 16437651 16437652 . 0 + +chr19 16770148 16770149 . 0 + +chr19 17036021 17036022 . 0 + +chr19 17086170 17086171 . 0 + +chr19 17306181 17306182 . 0 + +chr19 17430409 17430410 . 0 + +chr19 17440683 17440684 . 0 + +chr19 17837219 17837220 . 0 + +chr19 17922910 17922911 . 0 + +chr19 17940750 17940751 . 0 + +chr19 18368333 18368334 . 0 + +chr19 18507104 18507105 . 0 + +chr19 18775287 18775288 . 0 + +chr19 19369286 19369287 . 0 + +chr19 19646441 19646442 rs146733860 0 + +chr19 20044852 20044853 . 0 + +chr19 20215031 20215032 . 0 + +chr19 22867889 22867890 . 0 + +chr19 23306606 23306607 . 0 + +chr19 23577974 23577975 . 0 + +chr19 24118362 24118363 . 0 + +chr19 33406222 33406223 rs201265851 0 + +chr19 35512685 35512686 rs200473202 0 + +chr19 35617235 35617236 . 0 + +chr19 35632137 35632138 . 0 + +chr19 36257771 36257772 . 0 + +chr19 36728056 36728057 . 0 + +chr19 38655073 38655074 . 0 + +chr19 38774464 38774465 . 0 + +chr19 38956650 38956651 . 0 + +chr19 38997258 38997259 . 0 + +chr19 39090421 39090422 . 0 + +chr19 39334472 39334473 . 0 + +chr19 39361934 39361935 . 0 + +chr19 39433392 39433393 . 0 + +chr19 39666198 39666199 . 0 + +chr19 40186802 40186803 . 0 + +chr19 40729169 40729170 . 0 + +chr19 40947974 40947975 . 0 + +chr19 41515952 41515953 rs112848152 0 + +chr19 41838009 41838010 . 0 + +chr19 42427188 42427189 . 0 + +chr19 42819093 42819094 . 0 + +chr19 42852493 42852494 . 0 + +chr19 43242785 43242786 . 0 + +chr19 44501105 44501106 . 0 + +chr19 44501105 44501106 . 0 + +chr19 44513300 44513301 . 0 + +chr19 45818864 45818865 . 0 + +chr19 46196096 46196097 . 0 + +chr19 47879777 47879778 . 0 + +chr19 48685647 48685648 . 0 + +chr19 48807356 48807357 . 0 + +chr19 48879425 48879426 . 0 + +chr19 49055674 49055675 . 0 + +chr19 49254106 49254107 . 0 + +chr19 49335956 49335957 . 0 + +chr19 49387415 49387416 . 0 + +chr19 49675060 49675061 . 0 + +chr19 49852005 49852006 . 0 + +chr19 50826907 50826908 . 0 + +chr19 52873279 52873280 . 0 + +chr19 53618630 53618631 . 0 + +chr19 54396030 54396031 rs112068507 0 + +chr19 54678076 54678077 . 0 + +chr19 54684875 54684876 . 0 + +chr19 54784058 54784059 . 0 + +chr19 55048389 55048390 . 0 + +chr19 55144979 55144980 . 0 + +chr19 55175721 55175722 . 0 + +chr19 56005237 56005238 . 0 + +chr19 56113569 56113570 . 0 + +chr19 56538642 56538643 . 0 + +chr19 57835096 57835097 . 0 + +chr19 58565341 58565342 . 0 + +chr19 58596035 58596036 . 0 + +chr20 398254 398255 . 0 + +chr20 1291580 1291581 . 0 + +chr20 1291580 1291581 . 0 + +chr20 2777169 2777170 . 0 + +chr20 3027533 3027534 . 0 + +chr20 5904464 5904465 . 0 + +chr20 9457315 9457316 . 0 + +chr20 11589299 11589300 . 0 + +chr20 14308287 14308288 . 0 + +chr20 14308287 14308288 . 0 + +chr20 18037228 18037229 . 0 + +chr20 20377559 20377560 . 0 + +chr20 24524066 24524067 . 0 + +chr20 25206283 25206284 . 0 + +chr20 25656918 25656919 rs200119232 0 + +chr20 30556492 30556493 . 0 + +chr20 30661176 30661177 rs73906729 0 + +chr20 30697674 30697675 . 0 + +chr20 31044137 31044138 . 0 + +chr20 32663785 32663786 rs141301283 0 + +chr20 33622892 33622893 . 0 + +chr20 34021901 34021902 . 0 + +chr20 34130599 34130600 . 0 + +chr20 35838318 35838319 . 0 + +chr20 36687693 36687694 . 0 + +chr20 37144772 37144773 . 0 + +chr20 39831177 39831178 . 0 + +chr20 39901145 39901146 . 0 + +chr20 40118355 40118356 . 0 + +chr20 43559248 43559249 . 0 + +chr20 45221016 45221017 . 0 + +chr20 46312062 46312063 . 0 + +chr20 49307814 49307815 . 0 + +chr20 50346371 50346372 . 0 + +chr20 52773887 52773888 . 0 + +chr20 52789771 52789772 . 0 + +chr20 56769923 56769924 . 0 + +chr20 57266991 57266992 . 0 + +chr20 57266991 57266992 . 0 + +chr20 61588313 61588314 . 0 + +chr20 61947868 61947869 . 0 + +chr20 62324175 62324176 . 0 + +chr20 62324175 62324176 . 0 + +chr20 62493408 62493409 rs147732108 0 + +chr21 10793742 10793743 . 0 + +chr21 17443447 17443448 . 0 + +chr21 17533033 17533034 rs112523503 0 + +chr21 22644081 22644082 . 0 + +chr21 24781439 24781440 . 0 + +chr21 30409895 30409896 . 0 + +chr21 30963616 30963617 . 0 + +chr21 31768746 31768747 rs146471086 0 + +chr21 34399432 34399433 . 0 + +chr21 40571466 40571467 . 0 + +chr21 41300954 41300955 . 0 + +chr21 43522443 43522444 . 0 + +chr21 43522443 43522444 . 0 + +chr21 43522449 43522450 . 0 + +chr21 43522449 43522450 . 0 + +chr21 44840992 44840993 rs142728625 0 + +chr21 44841183 44841184 . 0 + +chr21 45093849 45093850 . 0 + +chr21 46935500 46935501 . 0 + +chr21 47549438 47549439 . 0 + +chr21 47552468 47552469 rs201875609 0 + +chr21 47611320 47611321 . 0 + +chr21 48063405 48063406 rs79563329 0 + +chr22 19213773 19213774 . 0 + +chr22 19707654 19707655 rs200503937 0 + +chr22 19707654 19707655 rs200503937 0 + +chr22 20043735 20043736 . 0 + +chr22 20786354 20786355 . 0 + +chr22 20970744 20970745 . 0 + +chr22 22735605 22735606 . 0 + +chr22 22898281 22898282 . 0 + +chr22 23596157 23596158 . 0 + +chr22 26176178 26176179 . 0 + +chr22 26902857 26902858 rs143474250 0 + +chr22 30518030 30518031 . 0 + +chr22 30822896 30822897 . 0 + +chr22 32914149 32914150 . 0 + +chr22 34985971 34985972 . 0 + +chr22 37601547 37601548 . 0 + +chr22 38503697 38503698 . 0 + +chr22 39357586 39357587 rs202076860 0 + +chr22 39357586 39357587 rs202076860 0 + +chr22 39711541 39711542 . 0 + +chr22 39913530 39913531 . 0 + +chr22 40750249 40750250 . 0 + +chr22 40802176 40802177 rs150175947 0 + +chr22 42276637 42276638 . 0 + +chr22 46688583 46688584 . 0 + +chr22 50751777 50751778 . 0 + +chr22 50886985 50886986 . 0 + +chr22 51116917 51116918 . 0 + +chrX 2795286 2795287 rs138101249 0 + +chrX 2835832 2835833 . 0 + +chrX 2947134 2947135 . 0 + +chrX 10085777 10085778 . 0 + +chrX 10535512 10535513 . 0 + +chrX 12993221 12993222 . 0 + +chrX 16873290 16873291 . 0 + +chrX 18221761 18221762 . 0 + +chrX 18528974 18528975 . 0 + +chrX 18956948 18956949 rs41311493 0 + +chrX 19364612 19364613 . 0 + +chrX 23748642 23748643 . 0 + +chrX 24690730 24690731 . 0 + +chrX 34045133 34045134 . 0 + +chrX 35969492 35969493 . 0 + +chrX 38664291 38664292 . 0 + +chrX 39931011 39931012 . 0 + +chrX 43590561 43590562 . 0 + +chrX 44600338 44600339 . 0 + +chrX 44703624 44703625 . 0 + +chrX 46382501 46382502 . 0 + +chrX 46502751 46502752 . 0 + +chrX 46512968 46512969 . 0 + +chrX 47016694 47016695 . 0 + +chrX 47070288 47070289 . 0 + +chrX 47083880 47083881 . 0 + +chrX 48382314 48382315 . 0 + +chrX 49921129 49921130 . 0 + +chrX 50136377 50136378 . 0 + +chrX 51641231 51641232 . 0 + +chrX 52655405 52655406 . 0 + +chrX 53596616 53596617 . 0 + +chrX 54952149 54952150 . 0 + +chrX 55052387 55052388 . 0 + +chrX 55102585 55102586 . 0 + +chrX 56590683 56590684 . 0 + +chrX 62103867 62103868 . 0 + +chrX 64951062 64951063 . 0 + +chrX 69283051 69283052 . 0 + +chrX 69496067 69496068 . 0 + +chrX 70444224 70444225 . 0 + +chrX 70444224 70444225 . 0 + +chrX 70800619 70800620 . 0 + +chrX 70800619 70800620 . 0 + +chrX 71090404 71090405 . 0 + +chrX 71359324 71359325 . 0 + +chrX 71813028 71813029 . 0 + +chrX 75649430 75649431 . 0 + +chrX 75649860 75649861 . 0 + +chrX 79283752 79283753 . 0 + +chrX 82764437 82764438 . 0 + +chrX 83362713 83362714 . 0 + +chrX 94032277 94032278 . 0 + +chrX 96171606 96171607 . 0 + +chrX 100381703 100381704 . 0 + +chrX 100532474 100532475 . 0 + +chrX 103044081 103044082 . 0 + +chrX 107930702 107930703 . 0 + +chrX 107979423 107979424 . 0 + +chrX 108902632 108902633 . 0 + +chrX 110366397 110366398 . 0 + +chrX 110924632 110924633 . 0 + +chrX 114424015 114424016 . 0 + +chrX 114424015 114424016 . 0 + +chrX 114424403 114424404 . 0 + +chrX 114424403 114424404 . 0 + +chrX 115582919 115582920 . 0 + +chrX 117722347 117722348 . 0 + +chrX 117959263 117959264 . 0 + +chrX 119581875 119581876 . 0 + +chrX 124454172 124454173 . 0 + +chrX 124461289 124461290 . 0 + +chrX 129042558 129042559 . 0 + +chrX 134680817 134680818 . 0 + +chrX 135084388 135084389 . 0 + +chrX 135741023 135741024 . 0 + +chrX 138814675 138814676 . 0 + +chrX 151896231 151896232 . 0 + +chrX 152818801 152818802 . 0 + +chrX 153133557 153133558 rs199779713 0 + +chrX 153136382 153136383 . 0 + +chrX 153176125 153176126 . 0 + +chrX 153590764 153590765 . 0 + +chrX 154020138 154020139 rs200723584 0 + \ No newline at end of file diff --git a/VQI_GenomeBrowser.js b/VQI_GenomeBrowser.js index 812a767..dbead89 100755 --- a/VQI_GenomeBrowser.js +++ b/VQI_GenomeBrowser.js @@ -53,7 +53,15 @@ function VQI_GenomeBrowser(id) { var chrom = navigate[0].trim(); var chrom_start = Number(navigate[1].trim()); var chrom_end = Number(navigate[2].trim()); - graph(chrom, chrom_start, chrom_end); + //Only need to set bounds if current chromosome is already graphed + if (chrom == chrom_curr) + { + setBounds(chrom_start, chrom_end); + } + else + { + graph(chrom, chrom_start, chrom_end); + } }; /*this.makeNavigationForm = function () { var navigateBox = ""; @@ -173,24 +181,24 @@ function VQI_GenomeBrowser(id) { }; this.makeFormForColocalization(); - var removeTrack = function () { - var removedTrackName = $("#" + divId + " #removeTrack").val(); + var removeTrack = function (removedTrackName) { + //var removedTrackName = $("#" + divId + " #removeTrack").val(); if (removedTrackName != null) { for (var i in trackList) { var thisTrack = trackList[i]; if (thisTrack['name'] === removedTrackName) { - svg.select("g." + trackList[i]['name']).remove(); + svg.selectAll("g").data([trackList[i]['name']], function(d){return d;}).remove(); trackList.splice(i, 1); break; } } } updateAllTracksSelectBoxes(); - graph(chrom_curr, xScale.domain()[0], xScale.domain()[1]); + //graph(chrom_curr, xScale.domain()[0], xScale.domain()[1]); }; - this.makeFormForRemoveTrack = function () { + /*this.makeFormForRemoveTrack = function () { var removeTrackSelect = "Remove: "; for (var i in trackList) { var thisTrack = trackList[i]; @@ -234,7 +242,7 @@ function VQI_GenomeBrowser(id) { $("#" + divId).append(form); $("#" + divId + " #exporttrackbutton").on("click", exportTrack.bind(this)); } - this.makeFormForExportTrack(); + this.makeFormForExportTrack();*/ var self = this; @@ -332,7 +340,7 @@ function VQI_GenomeBrowser(id) { var divisor = (width) / ((xScale.domain()[1] - xScale.domain()[0]) * zoom.scale()); minX = -(((xScale.domain()[0] - xScale.domain()[1]) * zoom.scale()) + (panExtent[1] - (panExtent[1] - (width / divisor)))), - maxX = -(((xScale.domain()[0] - xScale.domain()[1])) + (panExtent[1] - panExtent[0])) * divisor * zoom.scale(); + maxX = -(((xScale.domain()[0] - xScale.domain()[1])) + (panExtent[1] - panExtent[0])) * divisor * zoom.scale(); tx = xScale.domain()[0] < panExtent[0] ? minX : @@ -340,7 +348,6 @@ function VQI_GenomeBrowser(id) { maxX : zoom.translate()[0]; return tx; - } this.navigate = function (chrom, chrom_start, chrom_end) { @@ -351,16 +358,18 @@ function VQI_GenomeBrowser(id) { var xMin = Number(min) > panExtent[0] ? Number(min) : panExtent[0]; var xMax = Number(max) < panExtent[1] ? Number(max) : panExtent[1]; - xScale.domain([panExtent[0], panExtent[1]]) - .range([0, width]); + var distance = (panExtent[1] - panExtent[0])/10000 - zoom.scaleExtent([1, (panExtent[1] - panExtent[0]) / 50]); + xScale.domain([panExtent[0], panExtent[0] + distance]) + .range([0,width]); + + zoom.scaleExtent([1/10000, (panExtent[1] - panExtent[0]) / 50 / 10000]); zoom.x(xScale).on("zoom", zoomed); svg.call(zoom); - var scale = (panExtent[1] - panExtent[0]) / (xMax - xMin); + var scale = (panExtent[1] - panExtent[0]) / (xMax - xMin) / 10000; zoom.scale(scale); @@ -412,20 +421,18 @@ function VQI_GenomeBrowser(id) { panExtent[0] = isNaN(min) ? 0 : min; panExtent[1] = isNaN(max) ? width : max; + var distance = (panExtent[1] - panExtent[0])/10000 + + /*xScale.domain([0,distance]) + .range([0,width]);*/ + fullXScale = d3.scale.linear() - .domain(panExtent) - .range([0, width]); + .domain([panExtent[0], panExtent[0] + distance]) + .range([0,width]); } var graph = function (chromosome, min, max) { - //Only need to set bounds if current chromosome is already graphed - if (chromosome == chrom_curr) - { - setBounds(min, max); - return; - } - svg.attr("height", height + 2 * margin); var self = this; @@ -476,53 +483,83 @@ function VQI_GenomeBrowser(id) { name = name || "track-" + (trackIndex + 1); if (type == 'cpg') { + initTrack(name, 50); addCpgTrack(thisData, name); data['type'] = 'cpg'; }else{ // if (type == 'bed') { + initTrack(name, 10); addBEDTrack(thisData, name); data['type'] = 'bed'; } data['name'] = name; clipPath.attr("height", Number(svg.attr("height"))); + zoomed(); return data; } - var addCpgTrack = function (data, name) { - + var initTrack = function (name, fHeight){ var bufferSpace = 20; - var fHeight = 50; + svg.attr("height", Number(svg.attr("height")) + fHeight + bufferSpace); var thisY = Number(svg.attr("height")) - 2 * margin - fHeight / 2; - if (graphRegion.select("g." + name).empty()) + graphRegion.selectAll("g").data([name], function(d){return d;}).enter().append("g"); + + var trackGroup = graphRegion.selectAll("g").data([name], function(d){return d;}) + .attr("transform", "translate(" + 0 + "," + thisY + ")"); + + + trackGroup.selectAll("text").data([name], function(d){return d;}).enter().append("text") + .attr("class", name) + .attr("x", 0) + .attr("y", -fHeight / 2 - bufferSpace / 2) + .attr("font-family", "sans-serif") + .attr("font-size", "12px") + .attr("fill", "red") + .text(name); + + if (trackGroup.select("rect.remove").empty()) { - graphRegion.append("g") - .attr("class", name) + trackGroup.append("rect") + .attr("height", 10) + .attr("width", 10) + .attr("x", width + 10) + .attr("y", -5) + .attr("class", "remove") + .on('click', function(){removeTrack(name);}); } - var trackGroup = graphRegion.select("g." + name) - .attr("transform", "translate(" + 0 + "," + thisY + ")"); - if (trackGroup.select("text." + name).empty()) + if (trackGroup.select("rect.export").empty()) { - trackGroup.append("text") - .attr("class", name) - .attr("x", 0) - .attr("y", -fHeight / 2 - bufferSpace / 2) - .attr("font-family", "sans-serif") - .attr("font-size", "12px") - .attr("fill", "red") - .text(name); + trackGroup.append("rect") + .attr("height", 10) + .attr("width", 10) + .attr("x", width + 30) + .attr("y", -5) + .attr("class", "export") + .on('click', function(){exportTrack(name);}); } - //Just a line - trackGroup.append("line") - .attr("x1", 0) - .attr("y1", 0) - .attr("x2", width) - .attr("y2", 0) - .style("stroke", "blue"); + if (trackGroup.select("rect.drag").empty()) + { + + var drag = d3.behavior.drag() + //.origin(function() { return {x: 0, y: d3.transform(trackGroup.attr("transform")).translate[1] }}) + .on("drag", function(){ + trackGroup = graphRegion.selectAll("g").data([name], function(d){return d;}) + .attr("transform", "translate(" + 0 + "," + Math.max(margin + fHeight/2 - bufferSpace/2, Math.min(svg.attr("height") - 2* margin, d3.transform(trackGroup.attr("transform")).translate[1] + d3.event.y)) + ")"); + //console.log(thisY + " " +d3.event.y); + }); + trackGroup.append("rect") + .attr("height", fHeight) + .attr("width", 10) + .attr("x", -20) + .attr("y", -fHeight/2) + .attr("class", "drag") + .call(drag); + } if (trackGroup.select("g.scalable").empty()) { @@ -531,7 +568,20 @@ function VQI_GenomeBrowser(id) { .append("g") .attr("class", "scalable"); } - var trackScalableGroup = trackGroup.select("g.scalable"); + } + + var addCpgTrack = function (data, name) { + + //Just a line + graphRegion.selectAll("g").data([name], function(d){return d;}) + .append("line") + .attr("x1", 0) + .attr("y1", 0) + .attr("x2", width) + .attr("y2", 0) + .style("stroke", "blue"); + + var trackScalableGroup = graphRegion.selectAll("g").data([name], function(d){return d;}).select("g.scalable"); trackScalableGroup.selectAll("rect") .data(data, function (d) { @@ -598,39 +648,12 @@ function VQI_GenomeBrowser(id) { } var addBEDTrack = function (data, name) { - var bufferSpace = 20; - var fHeight = 10; - svg.attr("height", Number(svg.attr("height")) + fHeight + bufferSpace); - var thisY = Number(svg.attr("height")) - 2 * margin - fHeight / 2; - if (graphRegion.select("g." + name).empty()) - { - graphRegion.append("g") - .attr("class", name) - } - var trackGroup = graphRegion.select("g." + name) - .attr("transform", "translate(" + 0 + "," + thisY + ")"); + var fHeight = 10; - if (trackGroup.select("text." + name).empty()) - { - trackGroup.append("text") - .attr("class", name) - .attr("x", 0) - .attr("y", -fHeight / 2 - bufferSpace / 2) - .attr("font-family", "sans-serif") - .attr("font-size", "12px") - .attr("fill", "red") - .text(name); - } + var trackScalableGroup = graphRegion.selectAll("g").data([name], function(d){return d;}).select("g.scalable"); - if (trackGroup.select("g.scalable").empty()) - { - trackGroup.append("g") - .attr("clip-path", "url(#clip)") - .append("g") - .attr("class", "scalable"); - } - var trackScalableGroup = trackGroup.select("g.scalable"); + //console.log(data[142]); trackScalableGroup.selectAll("line") .data(data, function (d) { @@ -646,6 +669,8 @@ function VQI_GenomeBrowser(id) { .enter() .append("line"); + // console.log(data[1]); + var tracks = trackScalableGroup.selectAll("line") .data(data, function (d) { return d; @@ -654,7 +679,6 @@ function VQI_GenomeBrowser(id) { return fullXScale(d[indexArray.start]); }) .attr("y1", function (d) { - return 0; }) .attr("x2", function (d) { @@ -687,7 +711,7 @@ function VQI_GenomeBrowser(id) { } }); - console.log(exons[1]); + //console.log(exons[1]); trackScalableGroup.selectAll("rect") .data(data, function (d) { @@ -1124,10 +1148,10 @@ function VQI_GenomeBrowser(id) { updateSelectBoxWithTracks(track1Select.get(0)); var track2Select = $("#" + divId + " #track2"); updateSelectBoxWithTracks(track2Select.get(0)); - var removeTrackSelect = $("#" + divId + " #removeTrack"); + /*var removeTrackSelect = $("#" + divId + " #removeTrack"); updateSelectBoxWithTracks(removeTrackSelect.get(0)); var exportTrackSelect = $("#" + divId + " #exportTrack"); - updateSelectBoxWithTracks(exportTrackSelect.get(0)); + updateSelectBoxWithTracks(exportTrackSelect.get(0));*/ } var updateSelectBoxWithTracks = function (selectBox) { selectBox = selectBox; @@ -1162,8 +1186,6 @@ function VQI_GenomeBrowser(id) { var blob = new Blob([txt], {type: "text/csv;charset=utf-8"}); saveAs(blob, filename + ".txt"); - - } } \ No newline at end of file diff --git a/VQI_GenomeBrowserDemo.html b/VQI_GenomeBrowserDemo.html index d675621..47cb3f4 100644 --- a/VQI_GenomeBrowserDemo.html +++ b/VQI_GenomeBrowserDemo.html @@ -7,6 +7,7 @@ + @@ -27,6 +28,9 @@ var genomeFile = file_dir + "./hg19_refgene.txt"; obj.addTrackFile(genomeFile, "HG19", 'bed'); + + var snpile = file_dir + "./Tile2contentsnpplotter.txt"; + obj.addTrackFile(snpFile, "Tile2 Content Snp", 'bed');