diff --git a/VQI_PathwayEditorGUI.js b/VQI_PathwayEditorGUI.js index 52b3835..597b24f 100644 --- a/VQI_PathwayEditorGUI.js +++ b/VQI_PathwayEditorGUI.js @@ -4,7 +4,7 @@ var VQI_PathwayEditorGUI = function (parent) { // var serverURL = "http://cardinal3.engr.uconn.edu/pathwayVisual/"; var services = {}; - services["pathwayFinderUrl"] = "http://bibci.engr.uconn.edu/puj07001/pathway_services/find_path_and_score/find_path_and_score.php"; + services["pathwayFinderUrl"] = "http://bibci.engr.uconn.edu/puj07001/pathway_services/find_path_and_score/find_path_and_score.php"; services['pathwayFinder'] = 'http://cardinal3.engr.uconn.edu/pathwayVisual/PathwayParser/ajaxJSON.php'; services['pathwaySaver'] = 'http://cardinal3.engr.uconn.edu/pathwayVisual/PathwayParser/updateDB_json.php'; services['pathwayScorer'] = 'http://cardinal3.engr.uconn.edu/pathwayVisual/ScoreSystem/getScore.php'; @@ -19,11 +19,11 @@ var VQI_PathwayEditorGUI = function (parent) { // Globals var self = this; var nodeTypes = ["bundleone", "bundletwo", "gene", "geneproduct", "protein", "rna", "microrna", "kinase", "ligand", "receptor", "biologicalprocess", "triangle", "rectangle", "circle", "ellipse", "pentagon", "hexagon", "heptagon", "octagon", "star", "diamond", "vee", "rhomboid", "label"]; - var edgeLineTypes = ["line", "dashed","dotted"]; - var arrowLineTypes = ["solid", "tbar", "arrow"]; + var edgeLineTypes = ["line", "dashed", "dotted"]; + var arrowLineTypes = ["solid", "tbar", "arrow"]; var personId = ""; - var pathName = ""; - var states = []; + var pathName = ""; + var states = []; var stateRecycle = []; var selectedForQueryNodes = []; var selectedForEditNodes = []; @@ -33,7 +33,7 @@ var VQI_PathwayEditorGUI = function (parent) { var coloredNodes = []; var edgeCounter = 0; var nodeCounter = 0; - var dupCounter = 0; + var dupCounter = 0; var loadCounts = 0; var target = 0; var header = ""; @@ -73,13 +73,13 @@ var VQI_PathwayEditorGUI = function (parent) { strVar += "
  • <\/input><\/li>"; strVar += "
  • <\/input><\/li>"; strVar += "
  • <\/input><\/li>"; - strVar += "
  • <\/input><\/li>"; - strVar += "
  • <\/input><\/li>"; - strVar += "
  • <\/input><\/li>"; + strVar += "
  • <\/input><\/li>"; + strVar += "
  • <\/input><\/li>"; + strVar += "
  • <\/input><\/li>"; strVar += "
  • <\/input><\/li>"; strVar += "
  • "; - strVar += "
  • <\/input><\/li>"; - strVar += " <\/ul>"; + strVar += "
  • <\/input><\/li>"; + strVar += " <\/ul>"; strVar += " "; strVar += " <\/li>"; strVar += "
  • "; @@ -87,7 +87,7 @@ var VQI_PathwayEditorGUI = function (parent) { strVar += "