diff --git a/.gitignore b/.gitignore
index 8fc38da..704add0 100644
--- a/.gitignore
+++ b/.gitignore
@@ -47,7 +47,3 @@ output/embeddings/gene_based/gene_based_embeddings_part1.pt
 output/embeddings/gene_based/gene_based_embeddings_part0.pt
 output/embeddings/gene_based/gene_based_embeddings_part2.pt
 output/gene_based_preprocessed/processed_genes.json
-output/embeddings/gene_based/gene_based_embeddings_part0.pt
-output/embeddings/gene_based/gene_based_embeddings_part1.pt
-output/embeddings/gene_based/gene_based_embeddings_part2.pt
-output/gene_based_preprocessed/processed_genes.json