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MssBenchmark/algos.yaml

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ChunjiangZhu Fix measurement of index size and indexing time in chemfp and Brutefo…
Latest commit 01adfa3 Sep 21, 2020 History 
…rce, and optimize the code
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bit:
jaccard:
Bruteforce:
disabled: false
docker-tag: ann-benchmarks-chemfp
singularity-tag: ann-bench-chemfp
module: ann_benchmarks.algorithms.bruteforce
constructor: BruteForceFPS
base-args: ["@metric"]
run-groups:
empty:
args: []
Balltree(Sklearn):
disabled: false
docker-tag: ann-benchmarks-sklearn
singularity-tag: ann-bench-sklearn
module: ann_benchmarks.algorithms.balltree
constructor: BallTree
base-args: ["@metric"]
run-groups:
ball:
args: [[1, 10, 20, 40, 100, 200, 400, 1000]]
VPtree(Nmslib):
disabled: false
docker-tag: ann-benchmarks-nmslib
singularity-tag: ann-bench-nmslib3
module: ann_benchmarks.algorithms.nmslib
constructor: NmslibReuseIndex
base-args: ["@metric", "Byte", "vptree"]
run-groups:
base:
# When @args is a dictionary, algorithm instances will be generated
# by taking the Cartesian product of all of its values.
arg-groups:
- {"tuneK": 10, "desiredRecall": [0.999, 0.997, 0.995, 0.99, 0.97, 0.95, 0.9, 0.85, 0.8,
0.7, 0.6, 0.5, 0.4, 0.3, 0.2, 0.1, 0.05, 0.02, 0.01]}
- False
Datasketch:
disabled: false
docker-tag: ann-benchmarks-datasketch
singularity-tag: ann-bench-datasketch
module: ann_benchmarks.algorithms.datasketch
constructor: DataSketch
base-args: ["@metric"]
run-groups:
base:
args: [[32, 64, 128, 256, 512, 1024, 2048],[10, 30, 50, 70]]
Hnsw(Nmslib):
disabled: false
docker-tag: ann-benchmarks-nmslib
singularity-tag: ann-bench-nmslib3
module: ann_benchmarks.algorithms.nmslib
constructor: NmslibReuseIndex
base-args: ["@metric", "Byte", "hnsw"]
run-groups:
M-48:
arg-groups:
- {"M": 48, "post": 2, "efConstruction": 800}
- False
query-args: [[50, 70, 90, 120, 160, 200, 400, 600, 700, 800, 1000,
1400, 1600, 2000]]
M-32:
arg-groups:
- {"M": 32, "post": 2, "efConstruction": 800}
- False
query-args: [[100, 300, 500, 700, 1000, 1500, 2000]]
M-20:
arg-groups:
- {"M": 20, "post": 0, "efConstruction": 800}
- False
query-args: [[2, 5, 10, 15, 20, 30, 40, 50, 70, 80]]
M-12:
arg-groups:
- {"M": 12, "post": 0, "efConstruction": 800}
- False
query-args: [[1, 2, 5, 10, 15, 20, 30, 40, 50, 70, 80]]
M-5:
arg-groups:
- {"M": 5, "post": 0, "efConstruction": 10}
- False
query-args: [[1, 2, 5, 10]]
M-2:
arg-groups:
- {"M": 2, "post": 0, "efConstruction": 1}
- False
query-args: [[1, 2]]
SW-graph(Nmslib):
disabled: false
docker-tag: ann-benchmarks-nmslib
singularity-tag: ann-bench-nmslib3
module: ann_benchmarks.algorithms.nmslib
constructor: NmslibReuseIndex
base-args: ["@metric", "Byte", "sw-graph"]
run-groups:
NN-96:
arg-groups:
- {"NN": 96}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-48:
arg-groups:
- {"NN": 48}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-24:
arg-groups:
- {"NN": 24}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-16:
arg-groups:
- {"NN": 16}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-10:
arg-groups:
- {"NN": 10}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-5:
arg-groups:
- {"NN": 5}
- False
query-args: [[30, 25, 20, 15, 10, 5, 4, 3, 2, 1]]
NN-2:
arg-groups:
- {"NN": 2}
- False
query-args: [[30, 25, 20, 15, 10, 5, 4, 3, 2, 1]]
NN-1:
arg-groups:
- {"NN": 1}
- False
query-args: [[30, 25, 20, 15, 10, 5, 4, 3, 2, 1]]
Pynndescent:
disabled: false
docker-tag: ann-benchmarks-pynndescent
singularity-tag: ann-bench-pynndescent
module: ann_benchmarks.algorithms.pynndescent
constructor: PyNNDescent
base-args: ["@metric"]
run-groups:
pynndescent:
args: [[2, 5, 10, 20, 40, 80, 120, 160], [2, 4, 8], [30]]
query-args: [[1.0, 2.0, 4.0, 8.0]]
Onng(Ngt):
disabled: false
docker-tag: ann-benchmarks-ngt
singularity-tag: ann-bench-ngt
module: ann_benchmarks.algorithms.onng_ngt
constructor: ONNG
base-args: ["@metric", "Byte", 1.0]
run-groups:
onng:
args: [[100, 300, 500, 1000], [10, 30, 50, 100], [10, 30, 50, 120]]
query-args: [[0.25, 0.5, 0.75, 1.0, 1.25, 1.5, 1.75, 2.0]]
Panng(Ngt):
disabled: false
docker-tag: ann-benchmarks-ngt
singularity-tag: ann-bench-ngt
module: ann_benchmarks.algorithms.panng_ngt
constructor: PANNG
base-args: ["@metric", "Byte"]
run-groups:
panng:
args: [[10, 20, 40], [40], [30, 60, 120]]
query-args: [[0.05, 0.1, 0.2, 0.4, 0.6, 0.8, 0.9, 0.95, 1.0, 1.02, 1.05, 1.1, 1.2, 1.5, 2.0]]
Risc:
disabled: false
docker-tag: ann-benchmarks-risc
singularity-tag: ann-bench-risc
module: ann_benchmarks.algorithms.risc
constructor: Risc
base-args: ["@metric", "Risc"]
run-groups:
empty:
args: []
DivideSkip:
disabled: false
docker-tag: ann-benchmarks-risc
singularity-tag: ann-bench-risc
module: ann_benchmarks.algorithms.risc
constructor: Risc
base-args: ["@metric", "DivideSkip"]
run-groups:
empty:
args: []
Chemfp:
disabled: false
docker-tag: ann-benchmarks-chemfp
singularity-tag: ann-bench-chemfp
module: ann_benchmarks.algorithms.chemfp
constructor: Chemfp
base-args: ["@metric"]
run-groups:
empty:
args: []
Folding:
disabled: false
docker-tag: ann-benchmarks-chemfp
singularity-tag: ann-bench-chemfp
module: ann_benchmarks.algorithms.folding
constructor: Folding
base-args: ["@metric"]
run-groups:
panng:
args: [[64, 128, 192, 256, 512]]
int:
jaccard:
Bruteforce:
disabled: false
docker-tag: ann-benchmarks-sklearn
singularity-tag: ann-bench-sklearn
module: ann_benchmarks.algorithms.bruteforce
constructor: BruteForceBLAS
base-args: ["@metric"]
run-groups:
base:
args: {}
Hnsw(Nmslib):
disabled: false
docker-tag: ann-benchmarks-nmslib
singularity-tag: ann-bench-nmslib3
module: ann_benchmarks.algorithms.nmslib
constructor: NmslibReuseIndex
base-args: ["@metric", "Int", "hnsw"]
run-groups:
M-48:
arg-groups:
- {"M": 48, "post": 2, "efConstruction": 800}
- False
query-args: [[50, 70, 90, 120, 160, 200, 400, 600, 700, 800, 1000,
1400, 1600, 2000]]
M-32:
arg-groups:
- {"M": 32, "post": 2, "efConstruction": 800}
- False
query-args: [[100, 300, 500, 700, 1000, 1500, 2000]]
M-20:
arg-groups:
- {"M": 20, "post": 0, "efConstruction": 800}
- False
query-args: [[2, 5, 10, 15, 20, 30, 40, 50, 70, 80]]
M-12:
arg-groups:
- {"M": 12, "post": 0, "efConstruction": 800}
- False
query-args: [[1, 2, 5, 10, 15, 20, 30, 40, 50, 70, 80]]
M-5:
arg-groups:
- {"M": 5, "post": 0, "efConstruction": 10}
- False
query-args: [[1, 2, 5, 10]]
M-2:
arg-groups:
- {"M": 2, "post": 0, "efConstruction": 1}
- False
query-args: [[1, 2]]
SW-graph(Nmslib):
disabled: false
docker-tag: ann-benchmarks-nmslib
singularity-tag: ann-bench-nmslib3
module: ann_benchmarks.algorithms.nmslib
constructor: NmslibReuseIndex
base-args: ["@metric", "Int", "sw-graph"]
run-groups:
NN-96:
arg-groups:
- {"NN": 96}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-48:
arg-groups:
- {"NN": 48}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-24:
arg-groups:
- {"NN": 24}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-16:
arg-groups:
- {"NN": 16}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-10:
arg-groups:
- {"NN": 10}
- False
query-args: [[800, 400, 200, 100, 50, 30, 20, 15, 10, 5, 1]]
NN-5:
arg-groups:
- {"NN": 5}
- False
query-args: [[30, 25, 20, 15, 10, 5, 4, 3, 2, 1]]
NN-2:
arg-groups:
- {"NN": 2}
- False
query-args: [[30, 25, 20, 15, 10, 5, 4, 3, 2, 1]]
NN-1:
arg-groups:
- {"NN": 1}
- False
query-args: [[30, 25, 20, 15, 10, 5, 4, 3, 2, 1]]
Onng(Ngt):
disabled: false
docker-tag: ann-benchmarks-ngt
singularity-tag: ann-bench-ngt
module: ann_benchmarks.algorithms.onng_ngt
constructor: ONNG
base-args: ["@metric", "Byte", 1.0]
run-groups:
onng:
args: [[100, 300, 500, 1000], [10, 30, 50, 100], [10, 30, 50, 120]]
query-args: [[0.25, 0.5, 0.75, 1.0, 1.25, 1.5, 1.75, 2.0]]
Risc:
disabled: false
docker-tag: ann-benchmarks-risc
singularity-tag: ann-bench-risc
module: ann_benchmarks.algorithms.risc
constructor: Risc
base-args: ["@metric", "Risc"]
run-groups:
empty:
args: []