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hw2/bids/code/bidscoin/bidscoiner.errors

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2020-02-25 09:52:09 - bidscoin - WARNING Existing BIDS output-directory found, which may result in duplicate data (with increased run-index). Make sure /data/bids/sub-TD902TD/ was cleaned-up from old data before (re)running the bidscoiner
2020-02-25 09:52:14 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_acq-AAHeadScout_dir-ROW_run-3_echo-1" -o "/data/bids/sub-TD902TD/extra_data" "/data/raw/sub-TD902TD/001-AAHead_Scout" (errorcode 0)
2020-02-25 09:52:14 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_acq-AAHeadScoutMPRsag_dir-InPlanePhaseEncodingDirection_run-1_echo-1" -o "/data/bids/sub-TD902TD/extra_data" "/data/raw/sub-TD902TD/002-AAHead_Scout_MPR_sag" (errorcode 0)
2020-02-25 09:52:14 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_acq-AAHeadScoutMPRcor_dir-InPlanePhaseEncodingDirection_run-1_echo-1" -o "/data/bids/sub-TD902TD/extra_data" "/data/raw/sub-TD902TD/003-AAHead_Scout_MPR_cor" (errorcode 0)
2020-02-25 09:52:15 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_acq-AAHeadScoutMPRtra_dir-InPlanePhaseEncodingDirection_run-1_echo-1" -o "/data/bids/sub-TD902TD/extra_data" "/data/raw/sub-TD902TD/004-AAHead_Scout_MPR_tra" (errorcode 0)
2020-02-25 09:52:21 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_run-3_T1w" -o "/data/bids/sub-TD902TD/anat" "/data/raw/sub-TD902TD/005-T1w" (errorcode 0)
2020-02-25 09:52:21 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_task-taskmusic_acq-epfid2d184_dir-COL_run-3_echo-1_sbref" -o "/data/bids/sub-TD902TD/func" "/data/raw/sub-TD902TD/006-task-music_SBRef" (errorcode 0)
2020-02-25 09:52:53 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_task-taskmusic_acq-epfid2d184_dir-COL_run-3_echo-1_bold" -o "/data/bids/sub-TD902TD/func" "/data/raw/sub-TD902TD/007-task-music" (errorcode 0)
2020-02-25 09:52:53 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_acq-taskmusicPhysioLog_dir-InPlanePhaseEncodingDirection_run-1_echo-EchoNumbers" -o "/data/bids/sub-TD902TD/extra_data" "/data/raw/sub-TD902TD/008-task-music_PhysioLog" (errorcode 2)
2020-02-25 09:52:53 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_task-taskprosody_acq-epfid2d184_dir-COL_run-5_echo-1_sbref" -o "/data/bids/sub-TD902TD/func" "/data/raw/sub-TD902TD/009-task-prosody_SBRef" (errorcode 0)
2020-02-25 09:52:54 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_task-taskprosody_acq-epfid2d184_dir-COL_run-5_echo-1_bold" -o "/data/bids/sub-TD902TD/func" "/data/raw/sub-TD902TD/010-task-prosody" (errorcode 0)
2020-02-25 09:52:54 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_acq-taskprosodyPhysioLog_dir-InPlanePhaseEncodingDirection_run-1_echo-EchoNumbers" -o "/data/bids/sub-TD902TD/extra_data" "/data/raw/sub-TD902TD/011-task-prosody_PhysioLog" (errorcode 2)
2020-02-25 09:52:54 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_task-taskprosody_acq-epfid2d184_dir-COL_run-6_echo-1_sbref" -o "/data/bids/sub-TD902TD/func" "/data/raw/sub-TD902TD/012-task-prosody_SBRef" (errorcode 0)
2020-02-25 09:53:34 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_task-taskprosody_acq-epfid2d184_dir-COL_run-6_echo-1_bold" -o "/data/bids/sub-TD902TD/func" "/data/raw/sub-TD902TD/013-task-prosody" (errorcode 0)
2020-02-25 09:53:34 - bidscoin - ERROR Failed to run /usr/local/bin/dcm2niix -b y -z y -i n -f "sub-TD902TD_acq-taskprosodyPhysioLog_dir-InPlanePhaseEncodingDirection_run-1_echo-EchoNumbers" -o "/data/bids/sub-TD902TD/extra_data" "/data/raw/sub-TD902TD/014-task-prosody_PhysioLog" (errorcode 2)
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/1
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/10
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/11
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/12
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/13
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/14
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/2
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/3
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/4
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/5
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/6
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/7
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/8
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/9
2020-02-25 09:53:34 - bidscoin - WARNING Cannot find dicom files in:/data/raw/sub-TD902TD/9