add singularity folder

mldrugdiscovery · Dec 15, 2019 · 0536c86 · 0536c86
1 parent 0d33996
commit 0536c86
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/ann_benchmarks/runner.py b/ann_benchmarks/runner.py
@@ -296,7 +296,7 @@ def run_singularity(definition, dataset, count, runs, timeout, batch, rq, radius
     strCmd = ' '.join(["'" + k + "'" for k in cmd])
     print('String of command', strCmd)
 
-    subprocess.check_call('singularity exec ../../singularity/ann-bench-nmslib3.sif python3 run_algorithm.py %s' %(strCmd), shell=True)
+    subprocess.check_call('singularity exec ./singularity/ann-bench-nmslib3.sif python3 run_algorithm.py %s' %(strCmd), shell=True)
     #subprocess.check_call('singularity exec ../singularity/ann-bench-pynndescent.sif python3 run_algorithm.py %s' %(strCmd), shell=True)
     #subprocess.check_call('singularity exec ../singularity/ann-bench-datasketch.sif python3 run_algorithm.py %s' %(strCmd), shell=True)
     #subprocess.check_call('singularity exec ../singularity/ann-bench-sklearn.sif python3 run_algorithm.py %s' %(strCmd), shell=True)