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Please, compile and run the code in Linux machine. | ||
Java source code is compiled and run by Java Virtual Machine (JVM) 1.6.0. | ||
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Please follow the instruction below: | ||
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(1) Compile the classes: | ||
>javac DecompressCG.java | ||
>chmod 777 * | ||
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(2) Run the tool: | ||
>java DecompressCG <reference_file_name> <archive_name> <out_file_name> | ||
This command will produce <out_file_name> | ||
Example: java Driver chr_ko224_21.fa chr21.nrgc.7z chr21.fa | ||
The above command will produce chr21.fa | ||
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(3) 7zip executable files should be in the running directory. | ||
For convenience we have already provided the executables. |