LFastqC - Fastq files compressor

Requirements:

• Ubuntu 16.04 64-bit and 8 GB of RAM.

To compress:

./compress fastq_file.fastq  

Output:

fastq_file.LFastqC

To decompress:

./decompress fastq_file.LFastqC 

Output:

fastq_file_fastq

MFCompress and Lpaq8

We provided a precompiled version for both compressors for Ubuntu 16.04 64-bit, no further action needed beside chmod MFCompressC, MFCompressD, and lpaq8.

Contact

Sultan AlYami
sultan.al_yami@uconn.edu