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DOC: Add make command to open CellProfiler Analyst
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pan14001 committed Mar 23, 2017
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Expand Up @@ -58,13 +58,14 @@ Type the `make help` to see a list of options:
Usage: make [TARGET] ...

Targets:
all (Default) Run full pipeline from image processing to plots.
help Show this help.
z-projection Generate maximum intensity projection images.
cellprofiler Collect statistics about all images.
gui-cellprofiler Interactively run CellProfiler.
stats Find significant wells from cellprofiler measurements.
clean-all Delete all output.
all (Default) Run full pipeline from image processing to plots.
help Show this help.
z-projection Generate maximum intensity projection images.
cellprofiler Collect statistics about all images.
gui-cp Interactively run CellProfiler.
gui-cpa Interactively run CellProfiler Analyst.
stats Find significant wells from cellprofiler measurements.
clean-all Delete all output.
```

Run the `Makefile` in this directory to generate all results.
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