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LFastqC - Fastq files compressor Requirements: To decompress: MFCompress and Lpaq8 Contact
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LFastqC - Fastq files compressor

Requirements:

  • Ubuntu 16.04 64-bit and 8 GB of RAM.

To compress:

python compress.py fastq_file.fastq

Output:

fastq_file.LFastqC

To decompress:

python decompress.py fastq_file.LFastqC

Output:

fastq_file_fastq

MFCompress and Lpaq8

We provided a precompiled version for both compressors for Ubuntu 16.04 64-bit, no further action needed beside chmod MFCompressC, MFCompressD, and lpaq8.

Contact

Sultan AlYami
sultan.al_yami@uconn.edu